RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YFL040WP43562 540 aa1.54□□□□□ -2.16
CTK3YML112W MNN5P46982 586 aa1.54□□□□□ -2.16
CTK3YML112W UFD1P53044 361 aa1.54□□□□□ -2.16
CTK3YML112W SNX41Q04053 625 aa1.54□□□□□ -2.16
CTK3YML112W NNT1Q05874 261 aa1.54□□□□□ -2.16
CTK3YML112W YPL278CQ08990 100 aa1.54□□□□□ -2.16
CTK3YML112W NFI1Q12216 726 aa1.54□□□□□ -2.16
CTK3YML112W RPL16BP26785 198 aaKnown RBP1.53□□□□□ -2.16
CTK3YML112W SPT7P35177 1332 aa1.53□□□□□ -2.16
CTK3YML112W YHL044WP38727 235 aa1.53□□□□□ -2.16
CTK3YML112W KRE29P40026 464 aa1.53□□□□□ -2.16
CTK3YML112W PCL7P40186 285 aa1.53□□□□□ -2.16
CTK3YML112W UTP25P40498 721 aaKnown RBP1.53□□□□□ -2.16
CTK3YML112W YIL012WP40551 113 aa1.53□□□□□ -2.16
CTK3YML112W YFL064CP43540 174 aa1.53□□□□□ -2.16
CTK3YML112W PRP24P49960 444 aaKnown RBP1.53□□□□□ -2.16
CTK3YML112W SWC4P53201 476 aa1.53□□□□□ -2.16
CTK3YML112W YNL095CP53932 642 aa1.53□□□□□ -2.16
CTK3YML112W SAM4Q08985 325 aaKnown RBP1.53□□□□□ -2.16
CTK3YML112W TY3A-GQ12173 290 aa1.53□□□□□ -2.16
CTK3YML112W RRP42Q12277 265 aaPredicted RBP1.53□□□□□ -2.16
CTK3YML112W TIM22Q12328 207 aa1.53□□□□□ -2.16
CTK3YML112W DCP1Q12517 231 aaPredicted RBP1.53□□□□□ -2.16
CTK3YML112W TY3A-IQ99219 290 aa1.53□□□□□ -2.16
CTK3YML112W IZH4Q99393 312 aa1.53□□□□□ -2.16
CTK3YML112W CDC42P19073 191 aa1.52□□□□□ -2.17
CTK3YML112W OPI1P21957 404 aa1.52□□□□□ -2.17
CTK3YML112W PRE7P23724 241 aaKnown RBP1.52□□□□□ -2.17
CTK3YML112W SMI1P32566 505 aa1.52□□□□□ -2.17
CTK3YML112W YEL043WP32618 956 aa1.52□□□□□ -2.17
CTK3YML112W MRPL3P36516 390 aa1.52□□□□□ -2.17
CTK3YML112W SIF2P38262 535 aa1.52□□□□□ -2.17
CTK3YML112W YER188WP40103 239 aa1.52□□□□□ -2.17
CTK3YML112W MPP10P47083 593 aaKnown RBP1.52□□□□□ -2.17
CTK3YML112W MIG2P53035 382 aa1.52□□□□□ -2.17
CTK3YML112W YGR266WP53326 701 aa1.52□□□□□ -2.17
CTK3YML112W PDR16P53860 351 aaKnown RBP1.52□□□□□ -2.17
CTK3YML112W ALG9P53868 555 aaKnown RBP1.52□□□□□ -2.17
CTK3YML112W RPL18AP0CX49 186 aaKnown RBP1.51□□□□□ -2.17
CTK3YML112W RPL18BP0CX50 186 aaKnown RBP1.51□□□□□ -2.17
CTK3YML112W MBA1P38300 278 aa1.51□□□□□ -2.17
CTK3YML112W YPL150WQ12152 901 aa1.51□□□□□ -2.17
CTK3YML112W YPR1Q12458 312 aa1.51□□□□□ -2.17
CTK3YML112W NUP157P40064 1391 aaKnown RBP1.5□□□□□ -2.17
CTK3YML112W POT1P27796 417 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
CTK3YML112W CAJ1P39101 391 aa1.5□□□□□ -2.17
CTK3YML112W AVT6P40074 448 aa1.5□□□□□ -2.17
CTK3YML112W INA22P40576 216 aa1.5□□□□□ -2.17
CTK3YML112W DSK2P48510 373 aa1.5□□□□□ -2.17
CTK3YML112W YLR446WQ06204 433 aa1.5□□□□□ -2.17
CTK3YML112W YLL007CQ07799 665 aa1.5□□□□□ -2.17
CTK3YML112W PML1Q07930 204 aaPredicted RBP1.5□□□□□ -2.17
CTK3YML112W YOR283WQ12040 230 aaKnown RBP1.5□□□□□ -2.17
CTK3YML112W GAL3P13045 520 aa1.49□□□□□ -2.17
CTK3YML112W PHO80P20052 293 aa1.49□□□□□ -2.17
CTK3YML112W OSM1P21375 501 aaKnown RBP1.49□□□□□ -2.17
CTK3YML112W VPH1P32563 840 aaKnown RBP1.49□□□□□ -2.17
CTK3YML112W BLI1P35727 113 aa1.49□□□□□ -2.17
CTK3YML112W TPO5P36029 618 aa1.49□□□□□ -2.17
CTK3YML112W MCH2P36032 473 aa1.49□□□□□ -2.17
CTK3YML112W EBP2P36049 427 aaKnown RBP1.49□□□□□ -2.17
CTK3YML112W MEP1P40260 492 aa1.49□□□□□ -2.17
CTK3YML112W SYS1P41544 203 aa1.49□□□□□ -2.17
CTK3YML112W YJR141WP47172 347 aaPredicted RBP1.49□□□□□ -2.17
CTK3YML112W COG7P53195 279 aa1.49□□□□□ -2.17
CTK3YML112W BIO4P53630 237 aa1.49□□□□□ -2.17
CTK3YML112W PRR2Q12310 699 aa1.49□□□□□ -2.17
CTK3YML112W SWI3P32591 825 aa1.48□□□□□ -2.17
CTK3YML112W RPS0AP32905 252 aaKnown RBP1.48□□□□□ -2.17
CTK3YML112W GPX1P36014 167 aa1.48□□□□□ -2.17
CTK3YML112W APE4P38821 490 aa1.48□□□□□ -2.17
CTK3YML112W LIN1P38852 340 aaPredicted RBP1.48□□□□□ -2.17
CTK3YML112W TDA11P38854 504 aa1.48□□□□□ -2.17
CTK3YML112W END3P39013 349 aa1.48□□□□□ -2.17
CTK3YML112W RPE1P46969 238 aa1.48□□□□□ -2.17
CTK3YML112W OKP1P53298 406 aa1.48□□□□□ -2.17
CTK3YML112W OSH6Q02201 448 aa1.48□□□□□ -2.17
CTK3YML112W TLG1Q03322 224 aa1.48□□□□□ -2.17
CTK3YML112W GRX3Q03835 250 aa1.48□□□□□ -2.17
CTK3YML112W YDL144CQ07589 356 aa1.48□□□□□ -2.17
CTK3YML112W YPR064WQ12492 139 aa1.48□□□□□ -2.17
CTK3YML112W BEM2P39960 2167 aaKnown RBP1.47□□□□□ -2.17
CTK3YML112W YEL009C-AA0A023PZF2 135 aa1.47□□□□□ -2.17
CTK3YML112W CLB6P32943 380 aa1.47□□□□□ -2.17
CTK3YML112W TRM7P38238 310 aaKnown RBP1.47□□□□□ -2.17
CTK3YML112W POP2P39008 433 aa1.47□□□□□ -2.17
CTK3YML112W TVP15Q03860 143 aa1.47□□□□□ -2.17
CTK3YML112W YLR297WQ05899 129 aa1.47□□□□□ -2.17
CTK3YML112W PBP4Q07362 185 aaKnown RBP1.47□□□□□ -2.17
CTK3YML112W PSY3Q12318 242 aa1.47□□□□□ -2.17
CTK3YML112W CDC37P06101 506 aaKnown RBP1.46□□□□□ -2.18
CTK3YML112W RAD7P06779 565 aa1.46□□□□□ -2.18
CTK3YML112W ZWF1P11412 505 aaKnown RBP1.46□□□□□ -2.18
CTK3YML112W SWD2P36104 329 aaPredicted RBP1.46□□□□□ -2.18
CTK3YML112W UIP5P36137 443 aa1.46□□□□□ -2.18
CTK3YML112W PHO89P38361 574 aa1.46□□□□□ -2.18
CTK3YML112W YIA6P40556 373 aa1.46□□□□□ -2.18
CTK3YML112W COX16P47081 118 aa1.46□□□□□ -2.18
CTK3YML112W NBP1P52919 319 aaPredicted RBP1.46□□□□□ -2.18
CTK3YML112W SWT21P53873 357 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms