RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W NUP2P32499 720 aa4.12□□□□□ -1.75
VPS36YLR417W GAB1P41733 394 aa4.12□□□□□ -1.75
VPS36YLR417W YGR266WP53326 701 aa4.12□□□□□ -1.75
VPS36YLR417W ATC1Q04005 294 aa4.12□□□□□ -1.75
VPS36YLR417W BER1Q06688 274 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W WTM1Q12363 437 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W PRP46Q12417 451 aaPredicted RBP4.12□□□□□ -1.75
VPS36YLR417W IZH4Q99393 312 aa4.12□□□□□ -1.75
VPS36YLR417W RPO21P04050 1733 aaKnown RBP4.11□□□□□ -1.75
VPS36YLR417W ISY1P21374 235 aaPredicted RBP4.11□□□□□ -1.75
VPS36YLR417W URA10P30402 227 aa4.11□□□□□ -1.75
VPS36YLR417W SPR1P32603 445 aa4.11□□□□□ -1.75
VPS36YLR417W KTI12P34253 313 aaKnown RBP4.11□□□□□ -1.75
VPS36YLR417W OM14P38325 134 aa4.11□□□□□ -1.75
VPS36YLR417W RCY1P39531 840 aa4.11□□□□□ -1.75
VPS36YLR417W AGP3P43548 558 aa4.11□□□□□ -1.75
VPS36YLR417W FMP33P46998 180 aa4.11□□□□□ -1.75
VPS36YLR417W SNX41Q04053 625 aa4.11□□□□□ -1.75
VPS36YLR417W DTD1Q07648 150 aaKnown RBP4.11□□□□□ -1.75
VPS36YLR417W YLL007CQ07799 665 aa4.11□□□□□ -1.75
VPS36YLR417W ATP6P00854 259 aa4.1□□□□□ -1.75
VPS36YLR417W RPS14AP06367 137 aaKnown RBP4.1□□□□□ -1.75
VPS36YLR417W RAD3P06839 778 aa4.1□□□□□ -1.75
VPS36YLR417W TIM17P39515 158 aa4.1□□□□□ -1.75
VPS36YLR417W RPS14BP39516 138 aaKnown RBP4.1□□□□□ -1.75
VPS36YLR417W SED5Q01590 340 aa4.1□□□□□ -1.75
VPS36YLR417W YPL077CQ02831 240 aa4.1□□□□□ -1.75
VPS36YLR417W YLR177WQ06251 628 aa4.1□□□□□ -1.75
VPS36YLR417W MRX9Q07349 420 aaKnown RBP4.1□□□□□ -1.75
VPS36YLR417W ERP3Q12403 225 aa4.1□□□□□ -1.75
VPS36YLR417W DDP1Q99321 188 aaKnown RBP4.1□□□□□ -1.75
VPS36YLR417W CHC1P22137 1653 aaKnown RBP4.1□□□□□ -1.75
VPS36YLR417W IML1P47170 1584 aa4.1□□□□□ -1.75
VPS36YLR417W AUS1Q08409 1394 aa4.1□□□□□ -1.75
VPS36YLR417W HPR1P17629 752 aaKnown RBP4.09□□□□□ -1.75
VPS36YLR417W ZRC1P20107 442 aa4.09□□□□□ -1.75
VPS36YLR417W TPO5P36029 618 aa4.09□□□□□ -1.75
VPS36YLR417W SCC4P40090 624 aa4.09□□□□□ -1.75
VPS36YLR417W SLM1P40485 686 aa4.09□□□□□ -1.75
VPS36YLR417W MRX5P47007 382 aa4.09□□□□□ -1.75
VPS36YLR417W MAL13P53338 473 aa4.09□□□□□ -1.75
VPS36YLR417W SPP2Q02521 185 aa4.09□□□□□ -1.75
VPS36YLR417W GRX3Q03835 250 aa4.09□□□□□ -1.75
VPS36YLR417W FAR10Q06001 478 aa4.09□□□□□ -1.75
VPS36YLR417W GPN3Q06543 272 aa4.09□□□□□ -1.75
VPS36YLR417W YKL068W-AQ3E826 78 aa4.09□□□□□ -1.75
VPS36YLR417W SEC7P11075 2009 aaKnown RBP4.09□□□□□ -1.75
VPS36YLR417W NTE1Q04958 1679 aa4.09□□□□□ -1.75
VPS36YLR417W SWI1P09547 1314 aa4.09□□□□□ -1.75
VPS36YLR417W PRB1P09232 635 aa4.09□□□□□ -1.76
VPS36YLR417W PDC2P32896 925 aa4.09□□□□□ -1.76
VPS36YLR417W PFS1P38872 237 aa4.09□□□□□ -1.76
VPS36YLR417W CHL4P38907 458 aa4.09□□□□□ -1.76
VPS36YLR417W PEX22P39718 180 aa4.09□□□□□ -1.76
VPS36YLR417W ENT5Q03769 411 aaKnown RBP4.09□□□□□ -1.76
VPS36YLR417W RPN8Q08723 338 aaKnown RBP4.09□□□□□ -1.76
VPS36YLR417W UTP23Q12339 254 aaKnown RBP4.09□□□□□ -1.76
VPS36YLR417W BCK1Q01389 1478 aa4.08□□□□□ -1.76
VPS36YLR417W RPL31AP0C2H8 113 aaKnown RBP4.08□□□□□ -1.76
VPS36YLR417W PRX1P34227 261 aaKnown RBP4.08□□□□□ -1.76
VPS36YLR417W MCH2P36032 473 aa4.08□□□□□ -1.76
VPS36YLR417W YKL071WP36086 256 aa4.08□□□□□ -1.76
VPS36YLR417W SOL2P37262 315 aa4.08□□□□□ -1.76
VPS36YLR417W TDA11P38854 504 aa4.08□□□□□ -1.76
VPS36YLR417W YJR054WP47114 497 aa4.08□□□□□ -1.76
VPS36YLR417W CDH1P53197 566 aa4.08□□□□□ -1.76
VPS36YLR417W SWC4P53201 476 aa4.08□□□□□ -1.76
VPS36YLR417W YGR015CP53208 328 aa4.08□□□□□ -1.76
VPS36YLR417W LIP2Q06005 328 aa4.08□□□□□ -1.76
VPS36YLR417W SPO14P36126 1683 aa4.08□□□□□ -1.76
VPS36YLR417W RPO41P13433 1351 aaKnown RBP4.08□□□□□ -1.76
VPS36YLR417W SPS100P13130 326 aa4.07□□□□□ -1.76
VPS36YLR417W ERD1P16151 362 aa4.07□□□□□ -1.76
VPS36YLR417W COT1P32798 439 aa4.07□□□□□ -1.76
VPS36YLR417W RPT5P33297 434 aaKnown RBP4.07□□□□□ -1.76
VPS36YLR417W YKL063CP35725 167 aa4.07□□□□□ -1.76
VPS36YLR417W SPT8P38915 602 aa4.07□□□□□ -1.76
VPS36YLR417W SOP4P39543 234 aaPredicted RBP4.07□□□□□ -1.76
VPS36YLR417W SCS7Q03529 384 aa4.07□□□□□ -1.76
VPS36YLR417W RSA1Q08932 381 aa4.07□□□□□ -1.76
VPS36YLR417W RUD3Q12234 484 aaKnown RBP4.07□□□□□ -1.76
VPS36YLR417W RBD2Q12270 262 aa4.07□□□□□ -1.76
VPS36YLR417W TDH1P00360 332 aaKnown RBP4.07□□□□□ -1.76
VPS36YLR417W CMK2P22517 447 aa4.07□□□□□ -1.76
VPS36YLR417W YSR3P23501 404 aa4.07□□□□□ -1.76
VPS36YLR417W GCG1P32656 232 aaKnown RBP4.07□□□□□ -1.76
VPS36YLR417W SKG6P32900 734 aaPredicted RBP4.07□□□□□ -1.76
VPS36YLR417W SHE1P38200 338 aa4.07□□□□□ -1.76
VPS36YLR417W BMT2P38278 337 aa4.07□□□□□ -1.76
VPS36YLR417W SHE10P53075 577 aa4.07□□□□□ -1.76
VPS36YLR417W GMC2Q06201 188 aa4.07□□□□□ -1.76
VPS36YLR417W ASR1Q06834 288 aa4.07□□□□□ -1.76
VPS36YLR417W DOP1Q03921 1698 aa4.06□□□□□ -1.76
VPS36YLR417W RPL22AP05749 121 aaKnown RBP4.06□□□□□ -1.76
VPS36YLR417W MRPS28P21771 286 aa4.06□□□□□ -1.76
VPS36YLR417W RPL16BP26785 198 aaKnown RBP4.06□□□□□ -1.76
VPS36YLR417W YBR241CP38142 488 aa4.06□□□□□ -1.76
VPS36YLR417W SHQ1P40486 507 aaPredicted RBP4.06□□□□□ -1.76
VPS36YLR417W KAP114P53067 1004 aa4.06□□□□□ -1.76
VPS36YLR417W VHT1P53241 593 aa4.06□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms