RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	KGD1	P20967	1014 aa	Known RBP	6.57	□□□□□ -1.36
PAM17	YKR065C	AIM17	P23180	465 aa	Known RBP	6.57	□□□□□ -1.36
PAM17	YKR065C	YCP4	P25349	247 aa	Known RBP	6.57	□□□□□ -1.36
PAM17	YKR065C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
PAM17	YKR065C	ANS1	P38832	159 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	SPO73	P40031	143 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	PRM8	P53174	237 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	RHO5	P53879	331 aa	Known RBP	6.57	□□□□□ -1.36
PAM17	YKR065C	COG5	P53951	403 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	RNH202	Q05635	350 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	YOR376W	Q08900	122 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	YBR255C-A	Q3E776	120 aa		6.57	□□□□□ -1.36
PAM17	YKR065C	CYR1	P08678	2026 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	BAR1	P12630	587 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	UBC8	P28263	218 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	RPN2	P32565	945 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	ECM15	P35195	104 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	NSG1	P38837	291 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	SOK1	P40317	901 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	IKS1	P47042	667 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	BAT2	P47176	376 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	IMD4	P50094	524 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	TPS1	Q00764	495 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	YDR249C	Q03787	373 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	SEC13	Q04491	297 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	UTP21	Q06078	939 aa	Predicted RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	SYO1	Q07395	620 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	AIM6	Q07716	390 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	LOT6	Q07923	191 aa		6.56	□□□□□ -1.36
PAM17	YKR065C	BRX1	Q08235	291 aa	Known RBP	6.56	□□□□□ -1.36
PAM17	YKR065C	ARF1	P11076	181 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	TFS1	P14306	219 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	ERD1	P16151	362 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	BUD5	P25300	642 aa	Predicted RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	CPR3	P25719	182 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	ITR2	P30606	609 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	SNC1	P31109	117 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	SIP1	P32578	815 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	GPX1	P36014	167 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	FLO5	P38894	1075 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	PKP1	P40530	394 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	GCN20	P43535	752 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	CAK1	P43568	368 aa	Predicted RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	EMC2	P47133	292 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	PDR16	P53860	351 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	CTL1	Q03220	320 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	PFA5	Q03289	374 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	CGI121	Q03705	181 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	BUR2	Q05949	395 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	NFI1	Q12216	726 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	MHF1	Q3E835	90 aa		6.55	□□□□□ -1.36
PAM17	YKR065C	DET1	Q99288	334 aa	Known RBP	6.55	□□□□□ -1.36
PAM17	YKR065C	ERG8	P24521	451 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	NAM9	P27929	486 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	SAC1	P32368	623 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	SLC1	P33333	303 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	LHS1	P36016	881 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	PEX18	P38855	283 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	PTI1	P39927	425 aa	Predicted RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	ISC1	P40015	477 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	RIO2	P40160	425 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	GVP36	P40531	326 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	YGL101W	P53144	215 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	SPO19	Q03029	223 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	YDR541C	Q03049	344 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	PAL1	Q05518	499 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	ARV1	Q06541	321 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	DTD1	Q07648	150 aa	Known RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	ATX2	Q12067	313 aa		6.54	□□□□□ -1.36
PAM17	YKR065C	PRP46	Q12417	451 aa	Predicted RBP	6.54	□□□□□ -1.36
PAM17	YKR065C	IRA1	P18963	3092 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	DPM1	P14020	267 aa	Known RBP	6.53	□□□□□ -1.36
PAM17	YKR065C	NCP1	P16603	691 aa	Known RBP	6.53	□□□□□ -1.36
PAM17	YKR065C	GSH1	P32477	678 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	TPO5	P36029	618 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	MED8	P38304	223 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	ECM34	P38728	170 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	YEL068C	P39977	110 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	COG3	P40094	801 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	PDS1	P40316	373 aa	Predicted RBP	6.53	□□□□□ -1.36
PAM17	YKR065C	MEP3	P53390	489 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	ABZ2	Q03266	374 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	SPC19	Q03954	165 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	YPR127W	Q06494	345 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	MCP1	Q12106	302 aa		6.53	□□□□□ -1.36
PAM17	YKR065C	YCK1	P23291	538 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	EHD3	P28817	500 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	PRP21	P32524	280 aa	Predicted RBP	6.52	□□□□□ -1.37
PAM17	YKR065C	ALP1	P38971	573 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	YRB2	P40517	327 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	YGL235W	P53071	178 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	MPA43	P53583	542 aa	Predicted RBP	6.52	□□□□□ -1.37
PAM17	YKR065C	INP1	Q03694	420 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	SNT309	Q06091	175 aa	Predicted RBP	6.52	□□□□□ -1.37
PAM17	YKR065C	MLC2	Q06580	163 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	SWA2	Q06677	668 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	RDR1	Q08904	546 aa		6.52	□□□□□ -1.37
PAM17	YKR065C	YHR214C-D	P0CX93	97 aa		6.51	□□□□□ -1.37
PAM17	YKR065C	ERD2	P18414	219 aa		6.51	□□□□□ -1.37
PAM17	YKR065C	PTC6	P25646	442 aa		6.51	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms