RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	RRI1	Q12468	440 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YIR021W-A	Q3E739	70 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	VCX1	Q99385	411 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	GEA2	P39993	1459 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	AUS1	Q08409	1394 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	COX2	P00410	251 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RPP0	P05317	312 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	RAD10	P06838	210 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	PUT1	P09368	476 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	SAM2	P19358	384 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	CCA1	P21269	546 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	YCK1	P23291	538 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	SGV1	P23293	657 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	PPH22	P23595	377 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	PCL1	P24867	279 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	AHC2	P25649	128 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	MGT1	P26188	188 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	DEG1	P31115	442 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	LHP1	P33399	275 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	CMC1	P36064	111 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	ARA1	P38115	344 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	LDB7	P38210	180 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	TCM62	P38228	572 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	REG2	P38232	338 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	PRS3	P38689	320 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	RPF1	P38805	295 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	BIG1	P38813	335 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	ATG7	P38862	630 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	MLH1	P38920	769 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	LSM4	P40070	187 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	AVT6	P40074	448 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RFC2	P40348	353 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RPL10	P41805	221 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	YJL107C	P42947	387 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	NSE4	P43124	402 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	SFH5	P47008	294 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	IKS1	P47042	667 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	AIM22	P47051	409 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	ECM27	P47144	725 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RIB4	P50861	169 aa	Predicted RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	PMT5	P52867	743 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	NBP35	P52920	328 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	AIF1	P52923	378 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RRT6	P53117	311 aa	Predicted RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	YNR066C	P53752	436 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	DIG2	Q03373	323 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	YDR124W	Q04608	324 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	SMA2	Q04658	369 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	PAL1	Q05518	499 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	SSK1	Q07084	712 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	ALE1	Q08548	619 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	SYC1	Q08553	188 aa	Predicted RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	NUS1	Q12063	375 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	YPR063C	Q12160	140 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	RUP1	Q12242	671 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	YLR046C	Q12253	270 aa		3.17	□□□□□ -1.9
YKT6	YKL196C	MON2	P48563	1636 aa	Predicted RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	YLR419W	Q06698	1435 aa	Known RBP	3.17	□□□□□ -1.9
YKT6	YKL196C	HSL1	P34244	1518 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YLR302C	O13544	120 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	COX1	P00401	534 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	RHO1	P06780	209 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	CDC21	P06785	304 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	SPS2	P08459	502 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	RPS16A	P0CX51	143 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	RPS16B	P0CX52	143 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	MRP13	P12686	339 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	MTF1	P14908	341 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	STF2	P16965	84 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	ATP10	P18496	279 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	MGR1	P25573	417 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	PTC6	P25646	442 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	URK1	P27515	501 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	ERG9	P29704	444 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	SAC1	P32368	623 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	RGT1	P32862	1170 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	ECT1	P33412	323 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	SIP2	P34164	415 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	CBT1	P36038	271 aa	Predicted RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	YBR139W	P38109	508 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	SLM4	P38247	162 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	VHC1	P38329	1120 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YHR127W	P38833	243 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	IKI1	P38874	309 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	ERG28	P40030	148 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YIR016W	P40572	265 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	HOC1	P47124	396 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	AAD10	P47182	288 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YPT11	P48559	417 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	RPS12	P48589	143 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	YGL082W	P53155	381 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	JAC1	P53193	184 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YGR079W	P53249	370 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	YTP1	P53584	459 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	HCH1	P53834	153 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	UBC7	Q02159	165 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	ELP3	Q02908	557 aa	Known RBP	3.16	□□□□□ -1.9
YKT6	YKL196C	YDR541C	Q03049	344 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	PFA5	Q03289	374 aa		3.16	□□□□□ -1.9
YKT6	YKL196C	PRM6	Q04705	352 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms