RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	ATR1	P13090	542 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	YJU2	P28320	278 aa	Predicted RBP	5.09	□□□□□ -1.59
RPT1	YKL145W	OAR1	P35731	278 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	RIP-Chip
RPT1	YKL145W	SSO2	P39926	295 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	MPM1	P40364	252 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	AGP3	P43548	558 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	LOC1	P43586	204 aa	Predicted RBP	5.09	□□□□□ -1.59
RPT1	YKL145W	HOC1	P47124	396 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	RRN11	Q04712	507 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	YMR226C	Q05016	267 aa	Known RBP	5.09	□□□□□ -1.59
RPT1	YKL145W	RKM1	Q08961	583 aa	Predicted RBP	5.09	□□□□□ -1.59
RPT1	YKL145W	YIL002W-A	Q3E7Z5	69 aa		5.09	□□□□□ -1.59
RPT1	YKL145W	PEP4	P07267	405 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	PUT2	P07275	575 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	ZWF1	P11412	505 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	RPS1B	P23248	255 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	CHA1	P25379	360 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	PTC6	P25646	442 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	DOA1	P36037	715 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	AIM3	P38266	947 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	YHR210C	P38893	341 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	MIT1	P40002	666 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	THO1	P40040	218 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	PDS1	P40316	373 aa	Predicted RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	YRB2	P40517	327 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	BNA3	P47039	444 aa	Known RBP	5.08	□□□□□ -1.6
RPT1	YKL145W	SPO77	Q06134	477 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	DIC1	Q06143	298 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	YLR030W	Q07967	263 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	RRT8	Q08219	342 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	RSA1	Q08932	381 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	VIK1	Q12045	647 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	BSC1	Q12140	328 aa		5.08	□□□□□ -1.6
RPT1	YKL145W	NCE102	Q12207	173 aa	RIP-Chip data	5.08	□□□□□ -1.6	not detected
RPT1	YKL145W	VPS63	O13549	108 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	PDE2	P06776	526 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	ADE5,7	P07244	802 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	YCR006C	P25350	157 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	CTR86	P25355	563 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	MXR2	P25566	168 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	SAC1	P32368	623 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	APE2	P32454	952 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	MTR2	P34232	184 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	YUH1	P35127	236 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	ANS1	P38832	159 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	MBB1	P39534	108 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	CIN1	P40987	1014 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	YIP5	P53108	310 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	SMX3	P54999	86 aa	Predicted RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	RSM23	Q01163	450 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	KRE28	Q04431	385 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	YMR310C	Q04867	317 aa	Predicted RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	ATG38	Q05789	226 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	MDM30	Q05930	598 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	BSC6	Q08280	497 aa		5.07	□□□□□ -1.6
RPT1	YKL145W	SLH1	P53327	1967 aa	Known RBP	5.07	□□□□□ -1.6
RPT1	YKL145W	RPB5	P20434	215 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	CNA1	P23287	553 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YMC1	P32331	307 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	PTR2	P32901	601 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	NUF2	P33895	451 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YBR139W	P38109	508 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	BIG1	P38813	335 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	PRP39	P39682	629 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	RIO2	P40160	425 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	YFL015C	P43578	164 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	FAR7	P43592	221 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	TRM9	P49957	279 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	SYF2	P53277	215 aa	Predicted RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	NRM1	P53718	249 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YDR541C	Q03049	344 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	RSC9	Q03124	581 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YMR099C	Q03161	297 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	ARO10	Q06408	635 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	FMP27	Q06179	2628 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	SAG1	P20840	650 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	CYS4	P32582	507 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	ATP3	P38077	311 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	TDA11	P38854	504 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	COG3	P40094	801 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YGR201C	P42936	225 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YGL117W	P53133	265 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	PRM8	P53174	237 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YGR126W	P53274	230 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	ERG13	P54839	491 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	TPS1	Q00764	495 aa	Known RBP	5.06	□□□□□ -1.6
RPT1	YKL145W	EKI1	Q03764	534 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	RIM13	Q03792	727 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	SMA2	Q04658	369 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	CDA2	Q06703	312 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	POS5	Q06892	414 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YLR040C	Q07988	224 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	FDH1	Q08911	376 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	YLR126C	Q12288	251 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	SFM1	Q12314	213 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	GLE1	Q12315	538 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	MRX4	Q12467	430 aa		5.06	□□□□□ -1.6
RPT1	YKL145W	PET9	P18239	318 aa	Known RBP	5.05	□□□□□ -1.6
RPT1	YKL145W	URE2	P23202	354 aa	Known RBP	5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms