RNA–Protein interactions for RNA: YKL136W

YKL136W, Transcript of Dubious open reading frame, yeast

Gene YKL136W, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL136W	YKL136W	VPS9	P54787	451 aa		0.42	□□□□□ -2.34
YKL136W	YKL136W	YMR310C	Q04867	317 aa	Predicted RBP	0.42	□□□□□ -2.34
YKL136W	YKL136W	FCF1	Q05498	189 aa	Predicted RBP	0.42	□□□□□ -2.34
YKL136W	YKL136W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.42	□□□□□ -2.34
YKL136W	YKL136W	VPS1	P21576	704 aa	Known RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	HXT2	P23585	541 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	ADH5	P38113	351 aa	Known RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	SOP4	P39543	234 aa	Predicted RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	BTT1	P40314	149 aa	Predicted RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	YFL064C	P43540	174 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	YJR141W	P47172	347 aa	Predicted RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	TPN1	P53099	579 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	LIF1	P53150	421 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	COS6	P53344	381 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	BIO4	P53630	237 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	GRH1	Q04410	372 aa	Known RBP	0.41	□□□□□ -2.34
YKL136W	YKL136W	YOR268C	Q08734	132 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	VIK1	Q12045	647 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	GLE1	Q12315	538 aa		0.41	□□□□□ -2.34
YKL136W	YKL136W	UBR2	Q07963	1872 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	RPL6B	P05739	176 aa	Known RBP	0.4	□□□□□ -2.35
YKL136W	YKL136W	STE3	P06783	470 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	RRT12	P25381	491 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	PUP2	P32379	260 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	MEI5	P32489	222 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	COY1	P34237	679 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	MRPL3	P36516	390 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	GDI1	P39958	451 aa	Known RBP	0.4	□□□□□ -2.35
YKL136W	YKL136W	YIL012W	P40551	113 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	TAF6	P53040	516 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	RPL6A	Q02326	176 aa	Known RBP	0.4	□□□□□ -2.35
YKL136W	YKL136W	TVP15	Q03860	143 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	ARC18	Q05933	178 aa	Known RBP	0.4	□□□□□ -2.35
YKL136W	YKL136W	ATG5	Q12380	294 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	SPO24	Q3E752	67 aa		0.4	□□□□□ -2.35
YKL136W	YKL136W	ERD1	P16151	362 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	RBK1	P25332	333 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	MRPL6	P32904	214 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YOR062C	P36025	268 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YHR045W	P38775	560 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	ALP1	P38971	573 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	SUR2	P38992	349 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	PRP39	P39682	629 aa	Known RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	SEC28	P40509	296 aa	Known RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	MRPL49	P40858	161 aa	Predicted RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	RPA34	P47006	233 aa	Predicted RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	NUP57	P48837	541 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YPT32	P51996	222 aa	Known RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	YNL143C	P53908	130 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	SPO77	Q06134	477 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YLR446W	Q06204	433 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YDL144C	Q07589	356 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	YPL278C	Q08990	100 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	RTC5	Q12108	567 aa	Known RBP	0.39	□□□□□ -2.35
YKL136W	YKL136W	EMC6	Q12431	108 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	SKS1	Q12505	502 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	LAG2	Q92325	660 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	RGS2	Q99188	309 aa		0.39	□□□□□ -2.35
YKL136W	YKL136W	HSP82	P02829	709 aa	Known RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	RAD10	P06838	210 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	YLL053C	P0CD98	152 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	TOM40	P23644	387 aa	Known RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	YCR102C	P25608	368 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	GCG1	P32656	232 aa	Known RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	MBA1	P38300	278 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	GDT1	P38301	280 aa	Predicted RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	SPL2	P38839	148 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	YDR089W	P38966	869 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	VAB2	P40003	282 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	AVT6	P40074	448 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	COG3	P40094	801 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	PRP24	P49960	444 aa	Known RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	RSC1	P53236	928 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	RSM27	P53305	110 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	INM2	Q05533	292 aa		0.38	□□□□□ -2.35
YKL136W	YKL136W	NOT5	Q12514	560 aa	Predicted RBP	0.38	□□□□□ -2.35
YKL136W	YKL136W	PAN1	P32521	1480 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	ATG15	P25641	520 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	IMP1	P28627	190 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	ACB1	P31787	87 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	CDC13	P32797	924 aa	Known RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	IMP3	P32899	183 aa	Predicted RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	TPO5	P36029	618 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	MCH2	P36032	473 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	DAD2	P36162	133 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	YPC1	P38298	316 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	PES4	P39684	611 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	UTP25	P40498	721 aa	Known RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	YJL016W	P47072	561 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	SWT21	P53873	357 aa	Predicted RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	RVB1	Q03940	463 aa	Known RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	SNX41	Q04053	625 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	SXM1	Q04175	944 aa	Known RBP	0.37	□□□□□ -2.35
YKL136W	YKL136W	NNT1	Q05874	261 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	STE23	Q06010	1027 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	YBL112C	Q3E7Y4	105 aa		0.37	□□□□□ -2.35
YKL136W	YKL136W	TDH1	P00360	332 aa	Known RBP	0.36	□□□□□ -2.35
YKL136W	YKL136W	IFM1	P25038	676 aa		0.36	□□□□□ -2.35
YKL136W	YKL136W	VMA5	P31412	392 aa	Known RBP	0.36	□□□□□ -2.35
YKL136W	YKL136W	YHR035W	P38769	630 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms