RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC42	YKL042W	COX2	P00410	251 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	MET16	P18408	261 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC42	YKL042W	YKL187C	P34231	750 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	GGC1	P38988	300 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	TIS11	P47977	285 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	SHE10	P53075	577 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	YNR066C	P53752	436 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	YLR152C	P54072	576 aa		4.23	□□□□□ -1.73
SPC42	YKL042W	TPS1	Q00764	495 aa	Known RBP	4.23	□□□□□ -1.73
SPC42	YKL042W	REV1	P12689	985 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	PCL1	P24867	279 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	SPS19	P32573	292 aa	Known RBP	4.22	□□□□□ -1.73
SPC42	YKL042W	CYM1	P32898	989 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	PRM9	P39551	298 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	COA1	P40452	197 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	AGX1	P43567	385 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	PGU1	P47180	361 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	YGL262W	P53054	175 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	VEL1	P53058	206 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	HAL1	Q01766	294 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	YMR209C	Q03648	457 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	INP2	Q03824	705 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	VBA1	Q04301	562 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	API2	Q04413	109 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	CTS2	Q06350	511 aa		4.22	□□□□□ -1.73
SPC42	YKL042W	POL30	P15873	258 aa	Known RBP	4.21	□□□□□ -1.74
SPC42	YKL042W	EPT1	P22140	391 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	LDB16	P25587	256 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	SPT4	P32914	102 aa	Predicted RBP	4.21	□□□□□ -1.74
SPC42	YKL042W	MRPL27	P36526	146 aa	Predicted RBP	4.21	□□□□□ -1.74
SPC42	YKL042W	YAR1	P46683	200 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	YPT32	P51996	222 aa	Known RBP	4.21	□□□□□ -1.74
SPC42	YKL042W	YNL134C	P53912	376 aa	Known RBP	4.21	□□□□□ -1.74
SPC42	YKL042W	PEX30	Q06169	523 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	VIK1	Q12045	647 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	MED4	Q12343	284 aa		4.21	□□□□□ -1.74
SPC42	YKL042W	MSF1	P08425	469 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SPC42	YKL042W	TIP20	P33891	701 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	LIA1	P47120	325 aa	Known RBP	4.2	□□□□□ -1.74
SPC42	YKL042W	DPP1	Q05521	289 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	TY3A-G	Q12173	290 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	YDR018C	Q12185	396 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	TY3A-I	Q99219	290 aa		4.2	□□□□□ -1.74
SPC42	YKL042W	PSK1	P31374	1356 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	GPX1	P36014	167 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	SMP1	P38128	452 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	RFT1	P38206	574 aa	Predicted RBP	4.19	□□□□□ -1.74
SPC42	YKL042W	YBR062C	P38239	180 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	VAB2	P40003	282 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	BNA6	P43619	295 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	TAD2	P47058	250 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	FMP48	P53233	369 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	VHS1	Q03785	461 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	SEC13	Q04491	297 aa	Known RBP	4.19	□□□□□ -1.74
SPC42	YKL042W	MCH1	Q07376	486 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	YOR292C	Q08743	309 aa		4.19	□□□□□ -1.74
SPC42	YKL042W	MRP1	P10662	321 aa	Known RBP	4.18	□□□□□ -1.74
SPC42	YKL042W	RRT12	P25381	491 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	IME2	P32581	645 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	CDC13	P32797	924 aa	Known RBP	4.18	□□□□□ -1.74
SPC42	YKL042W	CSE1	P33307	960 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	YOX1	P34161	385 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	UTH1	P36135	365 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	SDS24	P38314	527 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	YHR045W	P38775	560 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	YNL040W	P53960	456 aa	Predicted RBP	4.18	□□□□□ -1.74
SPC42	YKL042W	TIM11	P81449	96 aa	Predicted RBP	4.18	□□□□□ -1.74
SPC42	YKL042W	OST6	Q03723	332 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	TSA2	Q04120	196 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	RNH1	Q04740	348 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	ADH6	Q04894	360 aa	Known RBP	4.18	□□□□□ -1.74
SPC42	YKL042W	YOL029C	Q08187	201 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	YOR114W	Q12219	294 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	RAX2	Q12465	1220 aa		4.18	□□□□□ -1.74
SPC42	YKL042W	HIS1	P00498	297 aa	Known RBP	4.17	□□□□□ -1.74
SPC42	YKL042W	RAD3	P06839	778 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	DAL82	P21705	255 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	CWP1	P28319	239 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	SUA5	P32579	426 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	MRPL6	P32904	214 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	HSM3	P38348	480 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	ECM34	P38728	170 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	RRT13	P40042	185 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SPC42	YKL042W	ALG11	P53954	548 aa	Known RBP	4.17	□□□□□ -1.74
SPC42	YKL042W	INP1	Q03694	420 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	BSC6	Q08280	497 aa		4.17	□□□□□ -1.74
SPC42	YKL042W	CBP6	P07253	162 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC42	YKL042W	POF1	P25576	258 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	AEP1	P32493	518 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	NPT1	P39683	429 aa	Known RBP	4.16	□□□□□ -1.74
SPC42	YKL042W	TPN1	P53099	579 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	PEX31	P53203	462 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	UTP15	Q04305	513 aa	Known RBP	4.16	□□□□□ -1.74
SPC42	YKL042W	TAF9	Q05027	157 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	SFH1	Q06168	426 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	ARV1	Q06541	321 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	YBL111C	Q3E7Y5	667 aa		4.16	□□□□□ -1.74
SPC42	YKL042W	BIG1	P38813	335 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms