RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W MRX9Q07349 420 aaKnown RBP2.27□□□□□ -2.05
CAP1YKL007W PGC1Q08959 321 aa2.27□□□□□ -2.05
CAP1YKL007W PRP46Q12417 451 aaPredicted RBP2.27□□□□□ -2.05
CAP1YKL007W NUP192P47054 1683 aa2.27□□□□□ -2.05
CAP1YKL007W PDR11P40550 1411 aa2.26□□□□□ -2.05
CAP1YKL007W MET5P47169 1442 aa2.26□□□□□ -2.05
CAP1YKL007W NUP157P40064 1391 aaKnown RBP2.26□□□□□ -2.05
CAP1YKL007W DOP1Q03921 1698 aa2.26□□□□□ -2.05
CAP1YKL007W INO2P26798 304 aa2.26□□□□□ -2.05
CAP1YKL007W ACB1P31787 87 aa2.26□□□□□ -2.05
CAP1YKL007W MEI5P32489 222 aa2.26□□□□□ -2.05
CAP1YKL007W ECM14P38836 430 aa2.26□□□□□ -2.05
CAP1YKL007W PRP39P39682 629 aaKnown RBP2.26□□□□□ -2.05
CAP1YKL007W BTT1P40314 149 aaPredicted RBP2.26□□□□□ -2.05
CAP1YKL007W SLM1P40485 686 aa2.26□□□□□ -2.05
CAP1YKL007W BUD13P46947 266 aaPredicted RBP2.26□□□□□ -2.05
CAP1YKL007W PMT4P46971 762 aa2.26□□□□□ -2.05
CAP1YKL007W YGL118CP53132 145 aa2.26□□□□□ -2.05
CAP1YKL007W CAX4P53223 239 aa2.26□□□□□ -2.05
CAP1YKL007W YNL146WP53906 100 aa2.26□□□□□ -2.05
CAP1YKL007W YMR244WQ04018 355 aa2.26□□□□□ -2.05
CAP1YKL007W CSI1Q04368 295 aa2.26□□□□□ -2.05
CAP1YKL007W HRT1Q08273 121 aa2.26□□□□□ -2.05
CAP1YKL007W NFI1Q12216 726 aa2.26□□□□□ -2.05
CAP1YKL007W SEC7P11075 2009 aaKnown RBP2.25□□□□□ -2.05
CAP1YKL007W BNI1P41832 1953 aa2.25□□□□□ -2.05
CAP1YKL007W DNF2Q12675 1612 aa2.25□□□□□ -2.05
CAP1YKL007W REP1P03871 373 aa2.25□□□□□ -2.05
CAP1YKL007W TAL1P15019 335 aaKnown RBP2.25□□□□□ -2.05
CAP1YKL007W VMA5P31412 392 aaKnown RBP2.25□□□□□ -2.05
CAP1YKL007W CTM1P38818 585 aa2.25□□□□□ -2.05
CAP1YKL007W ALP1P38971 573 aa2.25□□□□□ -2.05
CAP1YKL007W FYV8P46949 817 aaKnown RBP2.25□□□□□ -2.05
CAP1YKL007W TAF6P53040 516 aa2.25□□□□□ -2.05
CAP1YKL007W YPR063CQ12160 140 aa2.25□□□□□ -2.05
CAP1YKL007W YPL245WQ12179 454 aaKnown RBP2.25□□□□□ -2.05
CAP1YKL007W RPS23AP0CX29 145 aaKnown RBP2.24□□□□□ -2.05
CAP1YKL007W RPS23BP0CX30 145 aa2.24□□□□□ -2.05
CAP1YKL007W TRX1P22217 103 aaKnown RBP2.24□□□□□ -2.05
CAP1YKL007W RPB9P27999 122 aa2.24□□□□□ -2.05
CAP1YKL007W SMI1P32566 505 aa2.24□□□□□ -2.05
CAP1YKL007W YEL043WP32618 956 aa2.24□□□□□ -2.05
CAP1YKL007W CSE1P33307 960 aa2.24□□□□□ -2.05
CAP1YKL007W BUD2P33314 1104 aa2.24□□□□□ -2.05
CAP1YKL007W TKL2P33315 681 aa2.24□□□□□ -2.05
CAP1YKL007W YGL114WP53134 725 aa2.24□□□□□ -2.05
CAP1YKL007W CUE3P53137 624 aaKnown RBP2.24□□□□□ -2.05
CAP1YKL007W TPC1P53257 314 aa2.24□□□□□ -2.05
CAP1YKL007W MGR3Q04472 501 aa2.24□□□□□ -2.05
CAP1YKL007W YDR286CQ05530 114 aa2.24□□□□□ -2.05
CAP1YKL007W RDL2Q08742 149 aaKnown RBP2.24□□□□□ -2.05
CAP1YKL007W TRM10Q12400 293 aa2.24□□□□□ -2.05
CAP1YKL007W NUP188P52593 1655 aaKnown RBP2.24□□□□□ -2.05
CAP1YKL007W LTE1P07866 1435 aa2.24□□□□□ -2.05
CAP1YKL007W TY3B-IQ7LHG5 1498 aaKnown RBP2.23□□□□□ -2.05
CAP1YKL007W STF1P01098 86 aa2.23□□□□□ -2.05
CAP1YKL007W ASP1P38986 381 aaPredicted RBP2.23□□□□□ -2.05
CAP1YKL007W DSE1P40077 573 aa2.23□□□□□ -2.05
CAP1YKL007W YIL089WP40500 205 aa2.23□□□□□ -2.05
CAP1YKL007W PXR1P53335 271 aaPredicted RBP2.23□□□□□ -2.05
CAP1YKL007W RVB1Q03940 463 aaKnown RBP2.23□□□□□ -2.05
CAP1YKL007W YPL264CQ08980 353 aa2.23□□□□□ -2.05
CAP1YKL007W YDR262WQ12331 272 aa2.23□□□□□ -2.05
CAP1YKL007W TFC7Q12415 435 aa2.23□□□□□ -2.05
CAP1YKL007W SAL1D6W196 494 aa2.22□□□□□ -2.05
CAP1YKL007W POT1P27796 417 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
CAP1YKL007W UTR5P32630 166 aa2.22□□□□□ -2.05
CAP1YKL007W SIF2P38262 535 aa2.22□□□□□ -2.05
CAP1YKL007W MED8P38304 223 aa2.22□□□□□ -2.05
CAP1YKL007W POP2P39008 433 aa2.22□□□□□ -2.05
CAP1YKL007W HSH155P49955 971 aaKnown RBP2.22□□□□□ -2.05
CAP1YKL007W SGT2Q12118 346 aaKnown RBP2.22□□□□□ -2.05
CAP1YKL007W RNR2P09938 399 aaKnown RBP2.21□□□□□ -2.06
CAP1YKL007W ARO4P32449 370 aaKnown RBP2.21□□□□□ -2.06
CAP1YKL007W ALK2P32789 676 aaPredicted RBP2.21□□□□□ -2.06
CAP1YKL007W IML1P47170 1584 aa2.21□□□□□ -2.06
CAP1YKL007W YGL088WP53151 121 aa2.21□□□□□ -2.06
CAP1YKL007W MMS1Q06211 1407 aa2.21□□□□□ -2.06
CAP1YKL007W YLR419WQ06698 1435 aaKnown RBP2.21□□□□□ -2.06
CAP1YKL007W RLP24Q07915 199 aaKnown RBP2.21□□□□□ -2.06
CAP1YKL007W YLR012CQ07927 99 aa2.21□□□□□ -2.06
CAP1YKL007W VIK1Q12045 647 aa2.21□□□□□ -2.06
CAP1YKL007W IES3Q12345 250 aa2.21□□□□□ -2.06
CAP1YKL007W SPO24Q3E752 67 aa2.21□□□□□ -2.06
CAP1YKL007W SDH4P37298 181 aa2.2□□□□□ -2.06
CAP1YKL007W PES4P39684 611 aa2.2□□□□□ -2.06
CAP1YKL007W SCC4P40090 624 aa2.2□□□□□ -2.06
CAP1YKL007W YFR045WP43617 309 aa2.2□□□□□ -2.06
CAP1YKL007W SHE4P51534 789 aa2.2□□□□□ -2.06
CAP1YKL007W PDR16P53860 351 aaKnown RBP2.2□□□□□ -2.06
CAP1YKL007W YPL113CQ02961 396 aa2.2□□□□□ -2.06
CAP1YKL007W UBX2Q04228 584 aa2.2□□□□□ -2.06
CAP1YKL007W YDR114CQ04597 100 aa2.2□□□□□ -2.06
CAP1YKL007W BUR2Q05949 395 aa2.2□□□□□ -2.06
CAP1YKL007W PSY3Q12318 242 aa2.2□□□□□ -2.06
CAP1YKL007W ERP3Q12403 225 aa2.2□□□□□ -2.06
CAP1YKL007W CBP2P03874 630 aaPredicted RBP2.19□□□□□ -2.06
CAP1YKL007W ERD1P16151 362 aa2.19□□□□□ -2.06
CAP1YKL007W MRPL20P22354 195 aaPredicted RBP2.19□□□□□ -2.06
CAP1YKL007W VPH2P32341 215 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms