RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	AIM33	Q04516	312 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	ADH6	Q04894	360 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	SPC2	Q04969	178 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	CDD1	Q06549	142 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	YPR091C	Q06833	770 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	MCH1	Q07376	486 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	YDL109C	Q12103	647 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	HMS1	Q12398	434 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	PCL9	Q12477	304 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	RGS2	Q99188	309 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	FSH3	Q99369	266 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	RAD1	P06777	1100 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	SSC1	P0CS90	654 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	RPL12A	P0CX53	165 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	RPL12B	P0CX54	165 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	FBA1	P14540	359 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	VPS1	P21576	704 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	BMH1	P29311	267 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	ERG9	P29704	444 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	AST1	P35183	429 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	TAF14	P35189	244 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	POP7	P38291	140 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	MIC12	P38341	106 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	HIS2	P38635	335 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	ERG28	P40030	148 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	BTT1	P40314	149 aa	Predicted RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	COA1	P40452	197 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	IBA57	P47158	497 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	YGL159W	P53110	370 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	YGR168C	P53293	376 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	NOP19	P53317	196 aa	Predicted RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	BIO4	P53630	237 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	PRM15	Q03262	622 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	ECM11	Q04110	302 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	SMP3	Q04174	516 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	KRE28	Q04431	385 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	SEC10	Q06245	871 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	RIO1	Q12196	484 aa	Known RBP	2.46	□□□□□ -2.02
VHR1	YIL056W	SIA1	Q12212	622 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	YKL183C-A	Q3E765	70 aa		2.46	□□□□□ -2.02
VHR1	YIL056W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.45	□□□□□ -2.02	not detected
VHR1	YIL056W	DAL82	P21705	255 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	CDC50	P25656	391 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	MEI4	P29467	408 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	WSC4	P38739	605 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	RPC17	P47076	161 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	ATG17	Q06410	417 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	FCY22	Q12119	530 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	YCL012C	Q8J0M4	134 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	AI5_BETA	Q9ZZX0	354 aa		2.45	□□□□□ -2.02
VHR1	YIL056W	PET494	P07390	489 aa	Predicted RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	MAS2	P11914	482 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	CKI1	P20485	582 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	RBK1	P25332	333 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	ZUO1	P32527	433 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	SPO23	P33757	523 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MID2	P36027	376 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MCR1	P36060	302 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	FES1	P38260	290 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	BAT1	P38891	393 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	YNL194C	P40169	301 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	ATG18	P43601	500 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	COX16	P47081	118 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	LSG1	P53145	640 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	PXR1	P53335	271 aa	Predicted RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	RRN9	P53437	365 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	RVB1	Q03940	463 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	FAR8	Q05040	523 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	LDS2	Q08218	356 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	GPM2	Q12008	311 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	FOL3	Q12676	427 aa	Predicted RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	QCR7	P00128	127 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	SOD1	P00445	154 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	HTB1	P02293	131 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	HTB2	P02294	131 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	POX1	P13711	748 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	SEN2	P16658	377 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MXR2	P25566	168 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	TIR2	P33890	251 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MYO3	P36006	1272 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	DTR1	P38125	572 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MRP21	P38175	177 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	GPI18	P38211	433 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	URA8	P38627	578 aa	Predicted RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	SLM1	P40485	686 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	LYS12	P40495	371 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	SNZ3	P43545	298 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	LSM1	P47017	172 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	GET1	P53192	235 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	SNZ2	P53824	298 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	VAC7	P53950	1165 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MRS2	Q01926	470 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	OST6	Q03723	332 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	VHS1	Q03785	461 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	BER1	Q06688	274 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	SNF8	Q12483	233 aa		2.44	□□□□□ -2.02
VHR1	YIL056W	MEX67	Q99257	599 aa	Known RBP	2.44	□□□□□ -2.02
VHR1	YIL056W	YBR121C-A	P0C5L4	52 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	HPR1	P17629	752 aa	Known RBP	2.43	□□□□□ -2.02
VHR1	YIL056W	YMR31	P19955	123 aa		2.43	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms