RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	MRE11	P32829	692 aa		4.71	□□□□□ -1.66
RSC30	YHR056C	PFS2	P42841	465 aa	Known RBP	4.71	□□□□□ -1.66
RSC30	YHR056C	DIG2	Q03373	323 aa	Known RBP	4.71	□□□□□ -1.66
RSC30	YHR056C	SNO4	Q04902	237 aa		4.71	□□□□□ -1.66
RSC30	YHR056C	HSP33	Q08914	237 aa	Known RBP	4.71	□□□□□ -1.66
RSC30	YHR056C	HSP32	Q08992	237 aa		4.71	□□□□□ -1.66
RSC30	YHR056C	TGS1	Q12052	315 aa		4.71	□□□□□ -1.66
RSC30	YHR056C	USB1	Q12208	290 aa	Known RBP	4.71	□□□□□ -1.66
RSC30	YHR056C	GLY1	P37303	387 aa	Known RBP	4.7	□□□□□ -1.66
RSC30	YHR056C	HMS1	Q12398	434 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	MRX4	Q12467	430 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	TDH2	P00358	332 aa	Known RBP	4.7	□□□□□ -1.66
RSC30	YHR056C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
RSC30	YHR056C	ATP6	P00854	259 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	SCEI	P03882	235 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	CCA1	P21269	546 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	SED4	P25365	1065 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	GLC7	P32598	312 aa	Known RBP	4.7	□□□□□ -1.66
RSC30	YHR056C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
RSC30	YHR056C	IST2	P38250	946 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	YKR011C	Q02209	353 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	SPC19	Q03954	165 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	IRC25	Q07951	179 aa		4.7	□□□□□ -1.66
RSC30	YHR056C	THP2	O13539	261 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	TPK2	P06245	380 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	AMN1	P38285	549 aa	Predicted RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	DDI1	P40087	428 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	BAT2	P47176	376 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	GPI8	P49018	411 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	HMO1	Q03973	246 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	YDR514C	Q04408	483 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	TMA10	Q06177	86 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	CTS2	Q06350	511 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	MCH4	Q08268	501 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	THI72	Q08579	599 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	EXO70	P19658	623 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	PRP28	P23394	588 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	ATP7	P30902	174 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	ACH1	P32316	526 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	ISC10	P32645	267 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	YHR219W	P38900	624 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	RBG1	P39729	369 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	EXG2	P52911	562 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	YGL101W	P53144	215 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	YNR062C	P53748	327 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	YPL077C	Q02831	240 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	MRPL51	Q06090	140 aa	Predicted RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	ARR2	Q06597	130 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	PET9	P18239	318 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	MRPS28	P21771	286 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	SOR1	P35497	357 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	CUE1	P38428	203 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	OSH7	P38755	437 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	YHR035W	P38769	630 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	RPS0B	P46654	252 aa	Known RBP	4.69	□□□□□ -1.66
RSC30	YHR056C	RSM23	Q01163	450 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	SOR2	Q07786	357 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	MCT1	Q12283	360 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	TSC13	Q99190	310 aa		4.69	□□□□□ -1.66
RSC30	YHR056C	DPM1	P14020	267 aa	Known RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	CMK2	P22517	447 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	BUD5	P25300	642 aa	Predicted RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	GDH2	P33327	1092 aa	Known RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	RIP-Chip
RSC30	YHR056C	ECM8	P38246	354 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	FLO5	P38894	1075 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	DUO1	P53168	247 aa	Known RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	NGL2	Q03264	515 aa	Known RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	YDR102C	Q03864	110 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	BNA7	Q04066	261 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	RNH202	Q05635	350 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	YPR098C	Q06089	161 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	RPC19	P28000	142 aa	Known RBP	4.68	□□□□□ -1.66
RSC30	YHR056C	RPD3	P32561	433 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	SUR1	P33300	382 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	PEX6	P33760	1030 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	DML1	Q03652	475 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	VPS36	Q06696	566 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	THP1	Q08231	455 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	YLR122C	Q12312	125 aa		4.68	□□□□□ -1.66
RSC30	YHR056C	DSF1	P0CX08	502 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	YNR073C	P0CX09	502 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	TCM62	P38228	572 aa	Known RBP	4.67	□□□□□ -1.66
RSC30	YHR056C	CCZ1	P38273	704 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	YDR215C	Q12240	137 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	RTN2	Q12443	393 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	MHF2	Q3E829	80 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	CDC3	P32457	520 aa	Known RBP	4.67	□□□□□ -1.66
RSC30	YHR056C	HBS1	P32769	611 aa	Known RBP	4.67	□□□□□ -1.66
RSC30	YHR056C	ARC40	P38328	384 aa	Known RBP	4.67	□□□□□ -1.66
RSC30	YHR056C	YCK3	P39962	524 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	BNA2	P47125	453 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	DLT1	Q04216	342 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	YDL199C	Q12407	687 aa		4.67	□□□□□ -1.66
RSC30	YHR056C	SAC1	P32368	623 aa	Known RBP	4.66	□□□□□ -1.66
RSC30	YHR056C	VBA2	P38358	474 aa	Known RBP	4.66	□□□□□ -1.66
RSC30	YHR056C	VPS71	Q03433	280 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	HSP31	Q04432	237 aa		4.66	□□□□□ -1.66
RSC30	YHR056C	THP3	Q12049	470 aa	Known RBP	4.66	□□□□□ -1.66
RSC30	YHR056C	YPR015C	Q12531	247 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms