RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W SWM1Q12379 170 aa10.16□□□□□ -0.78
SNF6YHL025W FRE6Q12473 712 aa10.16□□□□□ -0.78
SNF6YHL025W HMG1P12683 1054 aa10.15□□□□□ -0.78
SNF6YHL025W SEC62P21825 274 aa10.15□□□□□ -0.78
SNF6YHL025W FUN26P31381 517 aa10.15□□□□□ -0.78
SNF6YHL025W NPL6P32832 435 aa10.15□□□□□ -0.78
SNF6YHL025W FCY21P40039 528 aa10.15□□□□□ -0.78
SNF6YHL025W NAS2P40555 220 aa10.15□□□□□ -0.78
SNF6YHL025W PPT1P53043 513 aa10.15□□□□□ -0.78
SNF6YHL025W APM1Q00776 475 aaPredicted RBP10.15□□□□□ -0.78
SNF6YHL025W YPL039WQ03080 316 aa10.15□□□□□ -0.78
SNF6YHL025W GIS1Q03833 894 aa10.15□□□□□ -0.78
SNF6YHL025W RDL2Q08742 149 aaKnown RBP10.15□□□□□ -0.78
SNF6YHL025W SIR2P06700 562 aa10.14□□□□□ -0.79
SNF6YHL025W NFT1P0CE68 1218 aa10.14□□□□□ -0.79
SNF6YHL025W EXG1P23776 448 aaKnown RBP10.14□□□□□ -0.79
SNF6YHL025W PUT3P25502 979 aaPredicted RBP10.14□□□□□ -0.79
SNF6YHL025W VPS17P32913 551 aa10.14□□□□□ -0.79
SNF6YHL025W PAU24P38155 120 aa10.14□□□□□ -0.79
SNF6YHL025W POP1P41812 875 aa10.14□□□□□ -0.79
SNF6YHL025W ECO1P43605 281 aa10.14□□□□□ -0.79
SNF6YHL025W PDR16P53860 351 aaKnown RBP10.14□□□□□ -0.79
SNF6YHL025W YDR209CQ03480 137 aa10.14□□□□□ -0.79
SNF6YHL025W YPR147CQ06522 304 aaKnown RBP10.14□□□□□ -0.79
SNF6YHL025W GPN3Q06543 272 aa10.14□□□□□ -0.79
SNF6YHL025W MDM32Q12171 622 aa10.14□□□□□ -0.79
SNF6YHL025W YPR1Q12458 312 aa10.14□□□□□ -0.79
SNF6YHL025W MTR10Q99189 972 aa10.14□□□□□ -0.79
SNF6YHL025W QCR7P00128 127 aa10.13□□□□□ -0.79
SNF6YHL025W CDC31P06704 161 aaKnown RBP10.13□□□□□ -0.79
SNF6YHL025W RPA135P22138 1203 aaKnown RBP10.13□□□□□ -0.79
SNF6YHL025W NUD1P32336 851 aa10.13□□□□□ -0.79
SNF6YHL025W REE1P40893 198 aa10.13□□□□□ -0.79
SNF6YHL025W PMT6P42934 759 aa10.13□□□□□ -0.79
SNF6YHL025W BPL1P48445 690 aaPredicted RBP10.13□□□□□ -0.79
SNF6YHL025W BRR6P53062 197 aa10.13□□□□□ -0.79
SNF6YHL025W RAI1P53063 387 aaKnown RBP10.13□□□□□ -0.79
SNF6YHL025W YGR126WP53274 230 aa10.13□□□□□ -0.79
SNF6YHL025W HOL1P53389 586 aa10.13□□□□□ -0.79
SNF6YHL025W TDA1Q03533 586 aa10.13□□□□□ -0.79
SNF6YHL025W YPR109WQ06104 294 aa10.13□□□□□ -0.79
SNF6YHL025W GRE1Q08969 168 aa10.13□□□□□ -0.79
SNF6YHL025W SFG1Q12507 346 aa10.13□□□□□ -0.79
SNF6YHL025W SUS1Q6WNK7 96 aa10.13□□□□□ -0.79
SNF6YHL025W GLT1Q12680 2145 aaKnown RBP10.12□□□□□ -0.79
SNF6YHL025W STE50P25344 346 aa10.12□□□□□ -0.79
SNF6YHL025W DOA4P32571 926 aa10.12□□□□□ -0.79
SNF6YHL025W RTT105P40063 208 aa10.12□□□□□ -0.79
SNF6YHL025W CWC23P52868 283 aaPredicted RBP10.12□□□□□ -0.79
SNF6YHL025W IMO32P53219 342 aa10.12□□□□□ -0.79
SNF6YHL025W SAY1P53324 424 aa10.12□□□□□ -0.79
SNF6YHL025W MIX14Q04341 121 aa10.12□□□□□ -0.79
SNF6YHL025W BAG7Q12128 409 aa10.12□□□□□ -0.79
SNF6YHL025W YBL113CQ7M4S9 792 aa10.12□□□□□ -0.79
SNF6YHL025W YAL064W-BO13512 126 aa10.11□□□□□ -0.79
SNF6YHL025W COX9P07255 59 aa10.11□□□□□ -0.79
SNF6YHL025W MRP1P10662 321 aaKnown RBP10.11□□□□□ -0.79
SNF6YHL025W PDX1P16451 410 aa10.11□□□□□ -0.79
SNF6YHL025W ZRT3P34240 503 aa10.11□□□□□ -0.79
SNF6YHL025W MBA1P38300 278 aa10.11□□□□□ -0.79
SNF6YHL025W SHO1P40073 367 aa10.11□□□□□ -0.79
SNF6YHL025W IMD3P50095 523 aaKnown RBP10.11□□□□□ -0.79
SNF6YHL025W PMT5P52867 743 aa10.11□□□□□ -0.79
SNF6YHL025W SDC1Q03323 175 aa10.11□□□□□ -0.79
SNF6YHL025W VBA4Q04602 768 aaKnown RBP10.11□□□□□ -0.79
SNF6YHL025W YOR378WQ08902 515 aa10.11□□□□□ -0.79
SNF6YHL025W NIP7Q08962 181 aaKnown RBP10.11□□□□□ -0.79
SNF6YHL025W YLR099W-AQ3E798 87 aa10.11□□□□□ -0.79
SNF6YHL025W YFR010W-AP0C5N0 62 aa10.1□□□□□ -0.79
SNF6YHL025W RPL43AP0CX25 92 aaKnown RBP10.1□□□□□ -0.79
SNF6YHL025W RPL43BP0CX26 92 aa10.1□□□□□ -0.79
SNF6YHL025W BOS1P25385 244 aa10.1□□□□□ -0.79
SNF6YHL025W THI4P32318 326 aa10.1□□□□□ -0.79
SNF6YHL025W SHE2P36068 246 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
SNF6YHL025W CCZ1P38273 704 aa10.1□□□□□ -0.79
SNF6YHL025W YHK8P38776 514 aa10.1□□□□□ -0.79
SNF6YHL025W ATG18P43601 500 aa10.1□□□□□ -0.79
SNF6YHL025W NIT2P47016 307 aa10.1□□□□□ -0.79
SNF6YHL025W YJL055WP47044 245 aa10.1□□□□□ -0.79
SNF6YHL025W CCC1P47818 322 aa10.1□□□□□ -0.79
SNF6YHL025W BNA7Q04066 261 aa10.1□□□□□ -0.79
SNF6YHL025W HLR1Q04429 423 aa10.1□□□□□ -0.79
SNF6YHL025W BRE4Q07660 1125 aa10.1□□□□□ -0.79
SNF6YHL025W MIM1Q08176 113 aa10.1□□□□□ -0.79
SNF6YHL025W PEX27Q08580 376 aa10.1□□□□□ -0.79
SNF6YHL025W RCN2Q12044 265 aa10.1□□□□□ -0.79
SNF6YHL025W OPI3P05375 206 aa10.09□□□□□ -0.79
SNF6YHL025W PDE2P06776 526 aa10.09□□□□□ -0.79
SNF6YHL025W UTR1P21373 530 aa10.09□□□□□ -0.79
SNF6YHL025W PPA2P28239 310 aa10.09□□□□□ -0.79
SNF6YHL025W MTH1P35198 433 aa10.09□□□□□ -0.79
SNF6YHL025W SRP102P36057 244 aaPredicted RBP10.09□□□□□ -0.79
SNF6YHL025W APD1P38281 316 aa10.09□□□□□ -0.79
SNF6YHL025W RFC4P40339 323 aaKnown RBP10.09□□□□□ -0.79
SNF6YHL025W SEC24P40482 926 aaKnown RBP10.09□□□□□ -0.79
SNF6YHL025W SER2P42941 309 aa10.09□□□□□ -0.79
SNF6YHL025W PBP1P53297 722 aaKnown RBP10.09□□□□□ -0.79
SNF6YHL025W ATG4P53867 494 aa10.09□□□□□ -0.79
SNF6YHL025W YMR252CQ04814 134 aa10.09□□□□□ -0.79
SNF6YHL025W RBS1Q05672 457 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms