RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C PRR1P28708 518 aa2.58□□□□□ -2
MSH4YFL003C ITR2P30606 609 aa2.58□□□□□ -2
MSH4YFL003C PMT2P31382 759 aa2.58□□□□□ -2
MSH4YFL003C MEI5P32489 222 aa2.58□□□□□ -2
MSH4YFL003C YPT35P38815 214 aaKnown RBP2.58□□□□□ -2
MSH4YFL003C COA1P40452 197 aa2.58□□□□□ -2
MSH4YFL003C YGR210CP42942 411 aa2.58□□□□□ -2
MSH4YFL003C TRM112P53738 135 aaPredicted RBP2.58□□□□□ -2
MSH4YFL003C ALG11P53954 548 aaKnown RBP2.58□□□□□ -2
MSH4YFL003C YPL077CQ02831 240 aa2.58□□□□□ -2
MSH4YFL003C IRC4Q03036 179 aa2.58□□□□□ -2
MSH4YFL003C SCS7Q03529 384 aa2.58□□□□□ -2
MSH4YFL003C MYO5Q04439 1219 aaKnown RBP2.58□□□□□ -2
MSH4YFL003C GRS2Q06817 618 aa2.58□□□□□ -2
MSH4YFL003C DIB1Q06819 143 aaPredicted RBP2.58□□□□□ -2
MSH4YFL003C CLP1Q08685 445 aaPredicted RBP2.58□□□□□ -2
MSH4YFL003C MEX67Q99257 599 aaKnown RBP2.58□□□□□ -2
MSH4YFL003C MATALPHA1P0CY06 175 aa2.57□□□□□ -2
MSH4YFL003C HMLALPHA1P0CY07 175 aa2.57□□□□□ -2
MSH4YFL003C FUN26P31381 517 aa2.57□□□□□ -2
MSH4YFL003C RCK2P38623 610 aa2.57□□□□□ -2
MSH4YFL003C YHR035WP38769 630 aa2.57□□□□□ -2
MSH4YFL003C PGU1P47180 361 aa2.57□□□□□ -2
MSH4YFL003C SNZ1Q03148 297 aa2.57□□□□□ -2
MSH4YFL003C ENT5Q03769 411 aaKnown RBP2.57□□□□□ -2
MSH4YFL003C ADH6Q04894 360 aaKnown RBP2.57□□□□□ -2
MSH4YFL003C ESA1Q08649 445 aa2.57□□□□□ -2
MSH4YFL003C YOR376WQ08900 122 aa2.57□□□□□ -2
MSH4YFL003C ERP3Q12403 225 aa2.57□□□□□ -2
MSH4YFL003C YBL111CQ3E7Y5 667 aa2.57□□□□□ -2
MSH4YFL003C TIS11P47977 285 aa2.57□□□□□ -2
MSH4YFL003C LSG1P53145 640 aaKnown RBP2.57□□□□□ -2
MSH4YFL003C NOP13P53883 403 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
MSH4YFL003C YOR387CQ08910 206 aa2.57□□□□□ -2
MSH4YFL003C MSH5Q12175 901 aa2.57□□□□□ -2
MSH4YFL003C YGK3Q12222 375 aaPredicted RBP2.57□□□□□ -2
MSH4YFL003C VPS1P21576 704 aaKnown RBP2.56□□□□□ -2
MSH4YFL003C ZRT1P32804 376 aa2.56□□□□□ -2
MSH4YFL003C SPO23P33757 523 aa2.56□□□□□ -2
MSH4YFL003C LDB7P38210 180 aa2.56□□□□□ -2
MSH4YFL003C PAN6P40459 309 aa2.56□□□□□ -2
MSH4YFL003C YJR030CP47101 745 aa2.56□□□□□ -2
MSH4YFL003C FCY22Q12119 530 aa2.56□□□□□ -2
MSH4YFL003C RPL31AP0C2H8 113 aaKnown RBP2.56□□□□□ -2
MSH4YFL003C YRF1-3P0CX14 1859 aa2.56□□□□□ -2
MSH4YFL003C YRF1-7P0CX15 1859 aa2.56□□□□□ -2
MSH4YFL003C FUS3P16892 353 aaKnown RBP2.56□□□□□ -2
MSH4YFL003C PBN1P25580 416 aa2.56□□□□□ -2
MSH4YFL003C NUP2P32499 720 aa2.56□□□□□ -2
MSH4YFL003C AVT5P38176 459 aa2.56□□□□□ -2
MSH4YFL003C NPT1P39683 429 aaKnown RBP2.56□□□□□ -2
MSH4YFL003C EGT2P42835 1041 aa2.56□□□□□ -2
MSH4YFL003C MRPL50P53724 139 aa2.56□□□□□ -2
MSH4YFL003C YRF1-6P53819 1859 aa2.56□□□□□ -2
MSH4YFL003C SUR7P54003 302 aa2.56□□□□□ -2
MSH4YFL003C KRE28Q04431 385 aa2.56□□□□□ -2
MSH4YFL003C YTH1Q06102 208 aaPredicted RBP2.56□□□□□ -2
MSH4YFL003C YLR012CQ07927 99 aa2.56□□□□□ -2
MSH4YFL003C DAL81P21657 970 aa2.55□□□□□ -2
MSH4YFL003C ARC19P33204 171 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C CWC25P53854 179 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C SLT2Q00772 484 aa2.55□□□□□ -2
MSH4YFL003C VBA1Q04301 562 aa2.55□□□□□ -2
MSH4YFL003C YMR027WQ04371 470 aa2.55□□□□□ -2
MSH4YFL003C ASR1Q06834 288 aa2.55□□□□□ -2
MSH4YFL003C FRE8Q12209 686 aa2.55□□□□□ -2
MSH4YFL003C APC1P53886 1748 aa2.55□□□□□ -2
MSH4YFL003C RPO26P20435 155 aa2.55□□□□□ -2
MSH4YFL003C RAD5P32849 1169 aaPredicted RBP2.55□□□□□ -2
MSH4YFL003C MRPL6P32904 214 aa2.55□□□□□ -2
MSH4YFL003C YKL063CP35725 167 aa2.55□□□□□ -2
MSH4YFL003C RPC37P36121 282 aa2.55□□□□□ -2
MSH4YFL003C SWD3P38123 315 aa2.55□□□□□ -2
MSH4YFL003C PMT4P46971 762 aa2.55□□□□□ -2
MSH4YFL003C HIT1P46973 164 aa2.55□□□□□ -2
MSH4YFL003C HAM1P47119 197 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C CRZ1P53968 678 aa2.55□□□□□ -2
MSH4YFL003C SMD2Q06217 110 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C YPR091CQ06833 770 aa2.55□□□□□ -2
MSH4YFL003C NDE2Q07500 545 aa2.55□□□□□ -2
MSH4YFL003C PPT2Q12036 173 aa2.55□□□□□ -2
MSH4YFL003C YDL199CQ12407 687 aa2.55□□□□□ -2
MSH4YFL003C IZH4Q99393 312 aa2.55□□□□□ -2
MSH4YFL003C TY4B-HP0C2J7 1802 aa2.55□□□□□ -2
MSH4YFL003C TY4B-JP47024 1803 aa2.55□□□□□ -2
MSH4YFL003C HIS1P00498 297 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C REP1P03871 373 aa2.55□□□□□ -2
MSH4YFL003C RPS14AP06367 137 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C COQ1P18900 473 aa2.55□□□□□ -2
MSH4YFL003C ZRC1P20107 442 aa2.55□□□□□ -2
MSH4YFL003C PPA2P28239 310 aa2.55□□□□□ -2
MSH4YFL003C TDA11P38854 504 aa2.55□□□□□ -2
MSH4YFL003C PFS1P38872 237 aa2.55□□□□□ -2
MSH4YFL003C COX14P39103 70 aa2.55□□□□□ -2
MSH4YFL003C RPS14BP39516 138 aaKnown RBP2.55□□□□□ -2
MSH4YFL003C ATG18P43601 500 aa2.55□□□□□ -2
MSH4YFL003C OST6Q03723 332 aa2.55□□□□□ -2
MSH4YFL003C BNA7Q04066 261 aa2.55□□□□□ -2
MSH4YFL003C PBA1Q05778 276 aa2.55□□□□□ -2
MSH4YFL003C SPO77Q06134 477 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms