RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C OKP1P53298 406 aa1.57□□□□□ -2.16
SMB1YER029C OSH6Q02201 448 aa1.57□□□□□ -2.16
SMB1YER029C YPL080CQ02826 108 aa1.57□□□□□ -2.16
SMB1YER029C YDR114CQ04597 100 aa1.57□□□□□ -2.16
SMB1YER029C VIK1Q12045 647 aa1.57□□□□□ -2.16
SMB1YER029C IES3Q12345 250 aa1.57□□□□□ -2.16
SMB1YER029C YOL163WP0CF20 169 aa1.56□□□□□ -2.16
SMB1YER029C RPL18AP0CX49 186 aaKnown RBP1.56□□□□□ -2.16
SMB1YER029C RPL18BP0CX50 186 aaKnown RBP1.56□□□□□ -2.16
SMB1YER029C RSA4P25382 515 aaKnown RBP1.56□□□□□ -2.16
SMB1YER029C YPS1P32329 569 aa1.56□□□□□ -2.16
SMB1YER029C MCH2P36032 473 aa1.56□□□□□ -2.16
SMB1YER029C YPC1P38298 316 aa1.56□□□□□ -2.16
SMB1YER029C YGR266WP53326 701 aa1.56□□□□□ -2.16
SMB1YER029C ABZ2Q03266 374 aa1.56□□□□□ -2.16
SMB1YER029C SNX41Q04053 625 aa1.56□□□□□ -2.16
SMB1YER029C YLR446WQ06204 433 aa1.56□□□□□ -2.16
SMB1YER029C MRX4Q12467 430 aa1.56□□□□□ -2.16
SMB1YER029C VMA2P16140 517 aaKnown RBP1.55□□□□□ -2.16
SMB1YER029C ERD1P16151 362 aa1.55□□□□□ -2.16
SMB1YER029C YHR035WP38769 630 aa1.55□□□□□ -2.16
SMB1YER029C POP2P39008 433 aa1.55□□□□□ -2.16
SMB1YER029C VAB2P40003 282 aa1.55□□□□□ -2.16
SMB1YER029C AIM20P40451 204 aa1.55□□□□□ -2.16
SMB1YER029C LIF1P53150 421 aa1.55□□□□□ -2.16
SMB1YER029C YNL095CP53932 642 aa1.55□□□□□ -2.16
SMB1YER029C IRC4Q03036 179 aa1.55□□□□□ -2.16
SMB1YER029C DCP1Q12517 231 aaPredicted RBP1.55□□□□□ -2.16
SMB1YER029C LAG2Q92325 660 aa1.55□□□□□ -2.16
SMB1YER029C YAK1P14680 807 aa1.54□□□□□ -2.16
SMB1YER029C TPO5P36029 618 aa1.54□□□□□ -2.16
SMB1YER029C YKR032WP36127 104 aa1.54□□□□□ -2.16
SMB1YER029C MED6P38782 295 aa1.54□□□□□ -2.16
SMB1YER029C PES4P39684 611 aa1.54□□□□□ -2.16
SMB1YER029C UTP25P40498 721 aaKnown RBP1.54□□□□□ -2.16
SMB1YER029C YFL064CP43540 174 aa1.54□□□□□ -2.16
SMB1YER029C UBC13P52490 153 aa1.54□□□□□ -2.16
SMB1YER029C PRO2P54885 456 aaKnown RBP1.54□□□□□ -2.16
SMB1YER029C RGM1Q00453 211 aa1.54□□□□□ -2.16
SMB1YER029C PEX30Q06169 523 aa1.54□□□□□ -2.16
SMB1YER029C REX3Q12090 404 aa1.54□□□□□ -2.16
SMB1YER029C STF1P01098 86 aa1.53□□□□□ -2.16
SMB1YER029C CDC37P06101 506 aaKnown RBP1.53□□□□□ -2.16
SMB1YER029C ZWF1P11412 505 aaKnown RBP1.53□□□□□ -2.16
SMB1YER029C KRR1P25586 316 aaPredicted RBP1.53□□□□□ -2.16
SMB1YER029C GCG1P32656 232 aaKnown RBP1.53□□□□□ -2.16
SMB1YER029C IMP3P32899 183 aaPredicted RBP1.53□□□□□ -2.16
SMB1YER029C MBA1P38300 278 aa1.53□□□□□ -2.16
SMB1YER029C SSO2P39926 295 aa1.53□□□□□ -2.16
SMB1YER029C OSW5P40219 148 aa1.53□□□□□ -2.16
SMB1YER029C SYS1P41544 203 aa1.53□□□□□ -2.16
SMB1YER029C GDS1P41913 522 aa1.53□□□□□ -2.16
SMB1YER029C VPS20Q04272 221 aa1.53□□□□□ -2.16
SMB1YER029C YMR111CQ04461 462 aaPredicted RBP1.53□□□□□ -2.16
SMB1YER029C YDL144CQ07589 356 aa1.53□□□□□ -2.16
SMB1YER029C APC9Q12107 265 aa1.53□□□□□ -2.16
SMB1YER029C PRR2Q12310 699 aa1.53□□□□□ -2.16
SMB1YER029C PFK27Q12471 397 aaPredicted RBP1.53□□□□□ -2.16
SMB1YER029C CDC13P32797 924 aaKnown RBP1.52□□□□□ -2.17
SMB1YER029C ZRT1P32804 376 aa1.52□□□□□ -2.17
SMB1YER029C YBL081WP38180 368 aaKnown RBP1.52□□□□□ -2.17
SMB1YER029C ATG12P38316 186 aa1.52□□□□□ -2.17
SMB1YER029C SWC5P38326 303 aa1.52□□□□□ -2.17
SMB1YER029C FET3P38993 636 aa1.52□□□□□ -2.17
SMB1YER029C END3P39013 349 aa1.52□□□□□ -2.17
SMB1YER029C CDC40P40968 455 aaPredicted RBP1.52□□□□□ -2.17
SMB1YER029C YPT32P51996 222 aaKnown RBP1.52□□□□□ -2.17
SMB1YER029C BIO4P53630 237 aa1.52□□□□□ -2.17
SMB1YER029C CAB5Q03941 241 aa1.52□□□□□ -2.17
SMB1YER029C YLR297WQ05899 129 aa1.52□□□□□ -2.17
SMB1YER029C YPL278CQ08990 100 aa1.52□□□□□ -2.17
SMB1YER029C UTP23Q12339 254 aaKnown RBP1.52□□□□□ -2.17
SMB1YER029C PAA1Q12447 191 aaKnown RBP1.52□□□□□ -2.17
SMB1YER029C YPR1Q12458 312 aa1.52□□□□□ -2.17
SMB1YER029C PHO80P20052 293 aa1.51□□□□□ -2.17
SMB1YER029C IFM1P25038 676 aa1.51□□□□□ -2.17
SMB1YER029C MRPL6P32904 214 aa1.51□□□□□ -2.17
SMB1YER029C MRPL3P36516 390 aa1.51□□□□□ -2.17
SMB1YER029C YIL012WP40551 113 aa1.51□□□□□ -2.17
SMB1YER029C MPP10P47083 593 aaKnown RBP1.51□□□□□ -2.17
SMB1YER029C DBP6P53734 629 aaKnown RBP1.51□□□□□ -2.17
SMB1YER029C RTC5Q12108 567 aaKnown RBP1.51□□□□□ -2.17
SMB1YER029C HIS3P06633 220 aa1.5□□□□□ -2.17
SMB1YER029C RAD7P06779 565 aa1.5□□□□□ -2.17
SMB1YER029C GAL7P08431 366 aa1.5□□□□□ -2.17
SMB1YER029C RPL31AP0C2H8 113 aaKnown RBP1.5□□□□□ -2.17
SMB1YER029C PET18P25362 215 aa1.5□□□□□ -2.17
SMB1YER029C YDR089WP38966 869 aa1.5□□□□□ -2.17
SMB1YER029C AVT6P40074 448 aa1.5□□□□□ -2.17
SMB1YER029C YER188WP40103 239 aa1.5□□□□□ -2.17
SMB1YER029C PIR5P46999 287 aa1.5□□□□□ -2.17
SMB1YER029C PRP24P49960 444 aaKnown RBP1.5□□□□□ -2.17
SMB1YER029C RIB4P50861 169 aaPredicted RBP1.5□□□□□ -2.17
SMB1YER029C TPN1P53099 579 aa1.5□□□□□ -2.17
SMB1YER029C SYF2P53277 215 aaPredicted RBP1.5□□□□□ -2.17
SMB1YER029C MGR3Q04472 501 aa1.5□□□□□ -2.17
SMB1YER029C ARC18Q05933 178 aaKnown RBP1.5□□□□□ -2.17
SMB1YER029C TAZ1Q06510 381 aa1.5□□□□□ -2.17
SMB1YER029C PBP4Q07362 185 aaKnown RBP1.5□□□□□ -2.17
SMB1YER029C SAM4Q08985 325 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms