RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C HDA2Q06629 674 aa5.18□□□□□ -1.58
SEC20YDR498C IPK1Q06667 281 aa5.18□□□□□ -1.58
SEC20YDR498C APC2Q12440 853 aa5.18□□□□□ -1.58
SEC20YDR498C SUS1Q6WNK7 96 aa5.18□□□□□ -1.58
SEC20YDR498C FLP1P03870 423 aa5.17□□□□□ -1.58
SEC20YDR498C SEC12P11655 471 aa5.17□□□□□ -1.58
SEC20YDR498C HMG1P12683 1054 aa5.17□□□□□ -1.58
SEC20YDR498C GAS1P22146 559 aaKnown RBP5.17□□□□□ -1.58
SEC20YDR498C BOS1P25385 244 aa5.17□□□□□ -1.58
SEC20YDR498C SNC1P31109 117 aa5.17□□□□□ -1.58
SEC20YDR498C FUN26P31381 517 aa5.17□□□□□ -1.58
SEC20YDR498C PAD1P33751 242 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
SEC20YDR498C TMA19P35691 167 aaKnown RBP5.17□□□□□ -1.58
SEC20YDR498C JEN1P36035 616 aa5.17□□□□□ -1.58
SEC20YDR498C MTC4P38335 694 aaKnown RBP5.17□□□□□ -1.58
SEC20YDR498C MSS4P38994 779 aa5.17□□□□□ -1.58
SEC20YDR498C YIL166CP40445 542 aa5.17□□□□□ -1.58
SEC20YDR498C ATG18P43601 500 aa5.17□□□□□ -1.58
SEC20YDR498C YJR120WP47157 116 aa5.17□□□□□ -1.58
SEC20YDR498C LYS20P48570 428 aaKnown RBP5.17□□□□□ -1.58
SEC20YDR498C DOC1P53068 250 aa5.17□□□□□ -1.58
SEC20YDR498C TPN1P53099 579 aa5.17□□□□□ -1.58
SEC20YDR498C ORM1P53224 222 aa5.17□□□□□ -1.58
SEC20YDR498C SNP1Q00916 300 aaPredicted RBP5.17□□□□□ -1.58
SEC20YDR498C EKI1Q03764 534 aa5.17□□□□□ -1.58
SEC20YDR498C SSK1Q07084 712 aa5.17□□□□□ -1.58
SEC20YDR498C LYS21Q12122 440 aaKnown RBP5.17□□□□□ -1.58
SEC20YDR498C PRP46Q12417 451 aaPredicted RBP5.17□□□□□ -1.58
SEC20YDR498C SET6Q12529 373 aa5.17□□□□□ -1.58
SEC20YDR498C CAN1P04817 590 aa5.16□□□□□ -1.58
SEC20YDR498C HIS3P06633 220 aa5.16□□□□□ -1.58
SEC20YDR498C ADK1P07170 222 aaKnown RBP5.16□□□□□ -1.58
SEC20YDR498C CAP2P13517 287 aa5.16□□□□□ -1.58
SEC20YDR498C GCN3P14741 305 aa5.16□□□□□ -1.58
SEC20YDR498C NCP1P16603 691 aaKnown RBP5.16□□□□□ -1.58
SEC20YDR498C STF2P16965 84 aa5.16□□□□□ -1.58
SEC20YDR498C PRP28P23394 588 aa5.16□□□□□ -1.58
SEC20YDR498C SCO1P23833 295 aa5.16□□□□□ -1.58
SEC20YDR498C PUT3P25502 979 aaPredicted RBP5.16□□□□□ -1.58
SEC20YDR498C FUN19P28003 413 aaPredicted RBP5.16□□□□□ -1.58
SEC20YDR498C PPA2P28239 310 aa5.16□□□□□ -1.58
SEC20YDR498C DCG1P32460 244 aa5.16□□□□□ -1.58
SEC20YDR498C ERG24P32462 438 aaKnown RBP5.16□□□□□ -1.58
SEC20YDR498C MKK2P32491 506 aa5.16□□□□□ -1.58
SEC20YDR498C NIC96P34077 839 aa5.16□□□□□ -1.58
SEC20YDR498C YKL071WP36086 256 aa5.16□□□□□ -1.58
SEC20YDR498C PEX32P38292 413 aa5.16□□□□□ -1.58
SEC20YDR498C AIM46P38885 310 aa5.16□□□□□ -1.58
SEC20YDR498C LEM3P42838 414 aa5.16□□□□□ -1.58
SEC20YDR498C MDV1P47025 714 aa5.16□□□□□ -1.58
SEC20YDR498C YJR141WP47172 347 aaPredicted RBP5.16□□□□□ -1.58
SEC20YDR498C PMT5P52867 743 aa5.16□□□□□ -1.58
SEC20YDR498C VOA1P53262 265 aa5.16□□□□□ -1.58
SEC20YDR498C TRS23Q03784 219 aa5.16□□□□□ -1.58
SEC20YDR498C SPC19Q03954 165 aa5.16□□□□□ -1.58
SEC20YDR498C YDR514CQ04408 483 aa5.16□□□□□ -1.58
SEC20YDR498C MRPL1Q04599 285 aa5.16□□□□□ -1.58
SEC20YDR498C RBS1Q05672 457 aaKnown RBP5.16□□□□□ -1.58
SEC20YDR498C TDA6Q06466 467 aa5.16□□□□□ -1.58
SEC20YDR498C MLC2Q06580 163 aa5.16□□□□□ -1.58
SEC20YDR498C YPR196WQ06595 470 aa5.16□□□□□ -1.58
SEC20YDR498C ASR1Q06834 288 aa5.16□□□□□ -1.58
SEC20YDR498C YDL109CQ12103 647 aa5.16□□□□□ -1.58
SEC20YDR498C MCP1Q12106 302 aa5.16□□□□□ -1.58
SEC20YDR498C YRA1Q12159 226 aaKnown RBP5.16□□□□□ -1.58
SEC20YDR498C INP53Q12271 1107 aa5.16□□□□□ -1.58
SEC20YDR498C YPR1Q12458 312 aa5.16□□□□□ -1.58
SEC20YDR498C COX1P00401 534 aa5.15□□□□□ -1.59
SEC20YDR498C SOD2P00447 233 aa5.15□□□□□ -1.59
SEC20YDR498C OPI3P05375 206 aa5.15□□□□□ -1.59
SEC20YDR498C PRB1P09232 635 aa5.15□□□□□ -1.59
SEC20YDR498C PET54P10834 293 aa5.15□□□□□ -1.59
SEC20YDR498C GLK1P17709 500 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C HOM6P31116 359 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C DOA4P32571 926 aa5.15□□□□□ -1.59
SEC20YDR498C TRS65P32893 560 aa5.15□□□□□ -1.59
SEC20YDR498C HIS7P33734 552 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C SDS22P36047 338 aa5.15□□□□□ -1.59
SEC20YDR498C YBR063CP38083 404 aa5.15□□□□□ -1.59
SEC20YDR498C ALG14P38242 237 aa5.15□□□□□ -1.59
SEC20YDR498C EXO84P38261 753 aa5.15□□□□□ -1.59
SEC20YDR498C CCZ1P38273 704 aa5.15□□□□□ -1.59
SEC20YDR498C IFA38P38286 347 aa5.15□□□□□ -1.59
SEC20YDR498C HTD2P38790 280 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C NAB3P38996 802 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
SEC20YDR498C HPA3P39979 161 aa5.15□□□□□ -1.59
SEC20YDR498C APS3P47064 194 aa5.15□□□□□ -1.59
SEC20YDR498C FMP48P53233 369 aa5.15□□□□□ -1.59
SEC20YDR498C RHO5P53879 331 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C ASI3P53983 676 aa5.15□□□□□ -1.59
SEC20YDR498C SSY1Q03770 852 aa5.15□□□□□ -1.59
SEC20YDR498C YMR315WQ04869 349 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C GAS2Q06135 555 aa5.15□□□□□ -1.59
SEC20YDR498C HEM25Q07534 307 aa5.15□□□□□ -1.59
SEC20YDR498C COQ10Q08058 207 aa5.15□□□□□ -1.59
SEC20YDR498C ENB1Q08299 606 aa5.15□□□□□ -1.59
SEC20YDR498C YOR283WQ12040 230 aaKnown RBP5.15□□□□□ -1.59
SEC20YDR498C PIN2Q12057 282 aa5.15□□□□□ -1.59
SEC20YDR498C RLM1Q12224 676 aa5.15□□□□□ -1.59
SEC20YDR498C YOR343CQ12484 108 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms