RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	RRS1	Q08746	203 aa	Known RBP	4.09	□□□□□ -1.75
SPR28	YDR218C	TIM18	Q08749	192 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	DDC1	Q08949	612 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	YCT1	Q12235	531 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	DET1	Q99288	334 aa	Known RBP	4.09	□□□□□ -1.75
SPR28	YDR218C	ECM5	Q03214	1411 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	TFS1	P14306	219 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	CTA1	P15202	515 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	RPS2	P25443	254 aa	Known RBP	4.08	□□□□□ -1.76
SPR28	YDR218C	POF1	P25576	258 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	YCR102C	P25608	368 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	PRX1	P34227	261 aa	Known RBP	4.08	□□□□□ -1.76
SPR28	YDR218C	PHD1	P36093	366 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	APD1	P38281	316 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	NDT80	P38830	627 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	YAT2	P40017	923 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	CSM2	P40465	213 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	BMT5	P40493	336 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	ICE2	P40499	491 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	JHD2	P47156	728 aa	Predicted RBP	4.08	□□□□□ -1.76
SPR28	YDR218C	SBH2	P52871	88 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	MGA1	P53050	456 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	SEC13	Q04491	297 aa	Known RBP	4.08	□□□□□ -1.76
SPR28	YDR218C	SFH1	Q06168	426 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	PET20	Q99373	253 aa		4.08	□□□□□ -1.76
SPR28	YDR218C	MTF1	P14908	341 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	ERD1	P16151	362 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	TPS2	P31688	896 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	TIR2	P33890	251 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	DBP7	P36120	742 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	RIB5	P38145	238 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	SDS24	P38314	527 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	RRP3	P38712	501 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	OSH3	P38713	996 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	CIN5	P40917	295 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	YCH1	P42937	148 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	VPS25	P47142	202 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	IMD3	P50095	523 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	BRR6	P53062	197 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	YGL204C	P53089	101 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	NSA1	P53136	463 aa	Predicted RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	MMS2	P53152	137 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	YNL140C	P53910	189 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	YLR460C	P54007	376 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	PRP38	Q00723	242 aa	Predicted RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	IRC15	Q02733	499 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	ODC1	Q03028	310 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	CCE1	Q03702	353 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	PRM6	Q04705	352 aa		4.07	□□□□□ -1.76
SPR28	YDR218C	YPR147C	Q06522	304 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	RDL1	Q12305	139 aa	Known RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	SME1	Q12330	94 aa	Predicted RBP	4.07	□□□□□ -1.76
SPR28	YDR218C	YAP1	P19880	650 aa	Known RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	MAK32	P23060	363 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	GIT1	P25346	518 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	TIP1	P27654	210 aa	Predicted RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	QRI5	P32344	111 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	HMT1	P38074	348 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	GPX2	P38143	162 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	SMB1	P40018	196 aa	Known RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	JLP2	P40206	208 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	SFH5	P47008	294 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	NUP57	P48837	541 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	MTM1	P53320	366 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	CWC25	P53854	179 aa	Known RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	RHO3	Q00245	231 aa	Known RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	NUP100	Q02629	959 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	INM2	Q05533	292 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	YPR098C	Q06089	161 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	MRPL51	Q06090	140 aa	Predicted RBP	4.06	□□□□□ -1.76
SPR28	YDR218C	GAT3	Q07928	141 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	YPL150W	Q12152	901 aa		4.06	□□□□□ -1.76
SPR28	YDR218C	STH1	P32597	1359 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	RPS28B	P0C0X0	67 aa	Known RBP	4.05	□□□□□ -1.76
SPR28	YDR218C	SSC1	P0CS90	654 aa	Known RBP	4.05	□□□□□ -1.76
SPR28	YDR218C	CAP2	P13517	287 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SPR28	YDR218C	CPR3	P25719	182 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	INO2	P26798	304 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	EHD3	P28817	500 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	HOM6	P31116	359 aa	Known RBP	4.05	□□□□□ -1.76
SPR28	YDR218C	CHK1	P38147	527 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	DER1	P38307	211 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	DHH1	P39517	506 aa	Known RBP	4.05	□□□□□ -1.76
SPR28	YDR218C	ALG8	P40351	577 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	SIM1	P40472	476 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	GDS1	P41913	522 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YFR057W	P43625	151 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	PMT4	P46971	762 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	IRC18	P47056	224 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YGL235W	P53071	178 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	PEX31	P53203	462 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	MAL13	P53338	473 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	FYV6	P53913	173 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YMR027W	Q04371	470 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YMR114C	Q04471	368 aa	Known RBP	4.05	□□□□□ -1.76
SPR28	YDR218C	TPO3	Q06451	622 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YLR012C	Q07927	99 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	YEH2	Q07950	538 aa		4.05	□□□□□ -1.76
SPR28	YDR218C	HTZ1	Q12692	134 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms