RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C PRP38Q00723 242 aaPredicted RBP3.41□□□□□ -1.86
TRM1YDR120C ATP16Q12165 160 aa3.41□□□□□ -1.86
TRM1YDR120C CKA2P19454 339 aa3.41□□□□□ -1.86
TRM1YDR120C ZRC1P20107 442 aa3.41□□□□□ -1.86
TRM1YDR120C MIR1P23641 311 aaKnown RBP3.41□□□□□ -1.86
TRM1YDR120C DEP1P31385 405 aa3.41□□□□□ -1.86
TRM1YDR120C LSG1P53145 640 aaKnown RBP3.41□□□□□ -1.86
TRM1YDR120C TRM82Q03774 444 aa3.41□□□□□ -1.86
TRM1YDR120C FSH2Q05015 223 aa3.41□□□□□ -1.86
TRM1YDR120C TAF10Q12030 206 aa3.41□□□□□ -1.86
TRM1YDR120C FRE8Q12209 686 aa3.41□□□□□ -1.86
TRM1YDR120C MSB2P32334 1306 aa3.41□□□□□ -1.86
TRM1YDR120C LAA1P39526 2014 aa3.4□□□□□ -1.86
TRM1YDR120C LDS1P31379 325 aa3.4□□□□□ -1.87
TRM1YDR120C PMT2P31382 759 aa3.4□□□□□ -1.87
TRM1YDR120C RCK2P38623 610 aa3.4□□□□□ -1.87
TRM1YDR120C MMS21P38632 267 aa3.4□□□□□ -1.87
TRM1YDR120C RRF1P38771 230 aa3.4□□□□□ -1.87
TRM1YDR120C NOP13P53883 403 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
TRM1YDR120C YLR297WQ05899 129 aa3.4□□□□□ -1.87
TRM1YDR120C STE7P06784 515 aa3.39□□□□□ -1.87
TRM1YDR120C RPL18AP0CX49 186 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C RPL18BP0CX50 186 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C GCD2P12754 651 aaPredicted RBP3.39□□□□□ -1.87
TRM1YDR120C IRA1P18963 3092 aa3.39□□□□□ -1.87
TRM1YDR120C DCC1P25559 380 aa3.39□□□□□ -1.87
TRM1YDR120C YPS1P32329 569 aa3.39□□□□□ -1.87
TRM1YDR120C CSE1P33307 960 aa3.39□□□□□ -1.87
TRM1YDR120C SHE3P38272 425 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C ENT5Q03769 411 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C CAB5Q03941 241 aa3.39□□□□□ -1.87
TRM1YDR120C BUR2Q05949 395 aa3.39□□□□□ -1.87
TRM1YDR120C ASP3-2P0CX77 362 aa3.39□□□□□ -1.87
TRM1YDR120C ASP3-3P0CX78 362 aa3.39□□□□□ -1.87
TRM1YDR120C ASP3-4P0CX79 362 aa3.39□□□□□ -1.87
TRM1YDR120C ASP3-1P0CZ17 362 aa3.39□□□□□ -1.87
TRM1YDR120C UNG1P12887 359 aa3.39□□□□□ -1.87
TRM1YDR120C CMK2P22517 447 aa3.39□□□□□ -1.87
TRM1YDR120C TOA1P32773 286 aa3.39□□□□□ -1.87
TRM1YDR120C END3P39013 349 aa3.39□□□□□ -1.87
TRM1YDR120C AIM23P47015 356 aa3.39□□□□□ -1.87
TRM1YDR120C SEH1P53011 349 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C TAF6P53040 516 aa3.39□□□□□ -1.87
TRM1YDR120C SUR7P54003 302 aa3.39□□□□□ -1.87
TRM1YDR120C RVB1Q03940 463 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C TSA2Q04120 196 aa3.39□□□□□ -1.87
TRM1YDR120C GAS2Q06135 555 aa3.39□□□□□ -1.87
TRM1YDR120C YLR177WQ06251 628 aa3.39□□□□□ -1.87
TRM1YDR120C CUR1Q06469 252 aa3.39□□□□□ -1.87
TRM1YDR120C SGT2Q12118 346 aaKnown RBP3.39□□□□□ -1.87
TRM1YDR120C PCL1P24867 279 aa3.38□□□□□ -1.87
TRM1YDR120C VMA5P31412 392 aaKnown RBP3.38□□□□□ -1.87
TRM1YDR120C SWC5P38326 303 aa3.38□□□□□ -1.87
TRM1YDR120C YNL320WP42840 284 aa3.38□□□□□ -1.87
TRM1YDR120C IGD1P43598 195 aa3.38□□□□□ -1.87
TRM1YDR120C YFR018CP43599 363 aa3.38□□□□□ -1.87
TRM1YDR120C HSH155P49955 971 aaKnown RBP3.38□□□□□ -1.87
TRM1YDR120C PXR1P53335 271 aaPredicted RBP3.38□□□□□ -1.87
TRM1YDR120C HAL1Q01766 294 aa3.38□□□□□ -1.87
TRM1YDR120C CDD1Q06549 142 aa3.38□□□□□ -1.87
TRM1YDR120C RPN6Q12377 434 aa3.38□□□□□ -1.87
TRM1YDR120C APC2Q12440 853 aa3.38□□□□□ -1.87
TRM1YDR120C MSS116P15424 664 aaKnown RBP3.37□□□□□ -1.87
TRM1YDR120C MNN9P39107 395 aaKnown RBP3.37□□□□□ -1.87
TRM1YDR120C SHQ1P40486 507 aaPredicted RBP3.37□□□□□ -1.87
TRM1YDR120C GPM2Q12008 311 aa3.37□□□□□ -1.87
TRM1YDR120C YPQ1Q12010 308 aa3.37□□□□□ -1.87
TRM1YDR120C IES6P32617 166 aa3.36□□□□□ -1.87
TRM1YDR120C RPS0AP32905 252 aaKnown RBP3.36□□□□□ -1.87
TRM1YDR120C TKL2P33315 681 aa3.36□□□□□ -1.87
TRM1YDR120C KDX1P36005 433 aa3.36□□□□□ -1.87
TRM1YDR120C COS9P36034 407 aa3.36□□□□□ -1.87
TRM1YDR120C SOL2P37262 315 aa3.36□□□□□ -1.87
TRM1YDR120C WSC4P38739 605 aa3.36□□□□□ -1.87
TRM1YDR120C MOB2P43563 287 aa3.36□□□□□ -1.87
TRM1YDR120C LOC1P43586 204 aaPredicted RBP3.36□□□□□ -1.87
TRM1YDR120C PGU1P47180 361 aa3.36□□□□□ -1.87
TRM1YDR120C RIB4P50861 169 aaPredicted RBP3.36□□□□□ -1.87
TRM1YDR120C CDH1P53197 566 aa3.36□□□□□ -1.87
TRM1YDR120C VHT1P53241 593 aa3.36□□□□□ -1.87
TRM1YDR120C YGR168CP53293 376 aa3.36□□□□□ -1.87
TRM1YDR120C SLT2Q00772 484 aa3.36□□□□□ -1.87
TRM1YDR120C YOR376WQ08900 122 aa3.36□□□□□ -1.87
TRM1YDR120C DDC1Q08949 612 aa3.36□□□□□ -1.87
TRM1YDR120C PAA1Q12447 191 aaKnown RBP3.36□□□□□ -1.87
TRM1YDR120C GCN1P33892 2672 aaKnown RBP3.36□□□□□ -1.87
TRM1YDR120C SAL1D6W196 494 aa3.36□□□□□ -1.87
TRM1YDR120C HSP26P15992 214 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
TRM1YDR120C ACB1P31787 87 aa3.36□□□□□ -1.87
TRM1YDR120C BMT2P38278 337 aa3.36□□□□□ -1.87
TRM1YDR120C UTP25P40498 721 aaKnown RBP3.36□□□□□ -1.87
TRM1YDR120C YJR054WP47114 497 aa3.36□□□□□ -1.87
TRM1YDR120C YGR015CP53208 328 aa3.36□□□□□ -1.87
TRM1YDR120C DBP6P53734 629 aaKnown RBP3.36□□□□□ -1.87
TRM1YDR120C RBK1P25332 333 aa3.35□□□□□ -1.87
TRM1YDR120C UTH1P36135 365 aa3.35□□□□□ -1.87
TRM1YDR120C SHE1P38200 338 aa3.35□□□□□ -1.87
TRM1YDR120C GPI18P38211 433 aa3.35□□□□□ -1.87
TRM1YDR120C SMF2P38778 549 aa3.35□□□□□ -1.87
TRM1YDR120C PCL7P40186 285 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms