RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	SMC6	Q12749	1114 aa		0.64	□□□□□ -2.31
YDR048C	YDR048C	MRPL6	P32904	214 aa		0.63	□□□□□ -2.31
YDR048C	YDR048C	GPX1	P36014	167 aa		0.63	□□□□□ -2.31
YDR048C	YDR048C	GDT1	P38301	280 aa	Predicted RBP	0.63	□□□□□ -2.31
YDR048C	YDR048C	LSM4	P40070	187 aa	Known RBP	0.63	□□□□□ -2.31
YDR048C	YDR048C	COG3	P40094	801 aa		0.63	□□□□□ -2.31
YDR048C	YDR048C	UTP25	P40498	721 aa	Known RBP	0.63	□□□□□ -2.31
YDR048C	YDR048C	SLM2	P53955	656 aa		0.63	□□□□□ -2.31
YDR048C	YDR048C	UTP6	Q02354	440 aa	Known RBP	0.63	□□□□□ -2.31
YDR048C	YDR048C	YMR310C	Q04867	317 aa	Predicted RBP	0.63	□□□□□ -2.31
YDR048C	YDR048C	TDH1	P00360	332 aa	Known RBP	0.62	□□□□□ -2.31
YDR048C	YDR048C	RBK1	P25332	333 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	RDS1	P25611	832 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	PUP2	P32379	260 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	MEI5	P32489	222 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	YOR062C	P36025	268 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	MBA1	P38300	278 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	SUR2	P38992	349 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	YJL055W	P47044	245 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	NNT1	Q05874	261 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	YDL144C	Q07589	356 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	YOR268C	Q08734	132 aa		0.62	□□□□□ -2.31
YDR048C	YDR048C	HSP82	P02829	709 aa	Known RBP	0.61	□□□□□ -2.31
YDR048C	YDR048C	UBA1	P22515	1024 aa	Known RBP	0.61	□□□□□ -2.31
YDR048C	YDR048C	CIN8	P27895	1000 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	CDC13	P32797	924 aa	Known RBP	0.61	□□□□□ -2.31
YDR048C	YDR048C	MYO3	P36006	1272 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	SPL2	P38839	148 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	SOP4	P39543	234 aa	Predicted RBP	0.61	□□□□□ -2.31
YDR048C	YDR048C	AVT6	P40074	448 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	AYR1	P40471	297 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	CAB4	P53332	305 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	GLE1	Q12315	538 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	ATG5	Q12380	294 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	BOL1	Q3E793	110 aa		0.61	□□□□□ -2.31
YDR048C	YDR048C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.61	□□□□□ -2.31
YDR048C	YDR048C	RPL6B	P05739	176 aa	Known RBP	0.6	□□□□□ -2.31
YDR048C	YDR048C	MRPL3	P36516	390 aa		0.6	□□□□□ -2.31
YDR048C	YDR048C	BTT1	P40314	149 aa	Predicted RBP	0.6	□□□□□ -2.31
YDR048C	YDR048C	YFL040W	P43562	540 aa		0.6	□□□□□ -2.31
YDR048C	YDR048C	YJL016W	P47072	561 aa		0.6	□□□□□ -2.31
YDR048C	YDR048C	TAF6	P53040	516 aa		0.6	□□□□□ -2.31
YDR048C	YDR048C	PXR1	P53335	271 aa	Predicted RBP	0.6	□□□□□ -2.31
YDR048C	YDR048C	RPL6A	Q02326	176 aa	Known RBP	0.6	□□□□□ -2.31
YDR048C	YDR048C	YCR025C	P25352	136 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	YCR102C	P25608	368 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	ACB1	P31787	87 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	SWE1	P32944	819 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	YBR062C	P38239	180 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	PRP24	P49960	444 aa	Known RBP	0.59	□□□□□ -2.31
YDR048C	YDR048C	TPN1	P53099	579 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	SUB1	P54000	292 aa	Known RBP	0.59	□□□□□ -2.31
YDR048C	YDR048C	INM2	Q05533	292 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	YLR446W	Q06204	433 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	YPL278C	Q08990	100 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	PAR32	Q12515	295 aa	Known RBP	0.59	□□□□□ -2.31
YDR048C	YDR048C	LAG2	Q92325	660 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	RGS2	Q99188	309 aa		0.59	□□□□□ -2.31
YDR048C	YDR048C	RAD10	P06838	210 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	ERD1	P16151	362 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	IFM1	P25038	676 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	ATG15	P25641	520 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	YSW1	P38280	609 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	YHL026C	P38740	315 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	CAJ1	P39101	391 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	YER135C	P40082	130 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	YIL012W	P40551	113 aa		0.58	□□□□□ -2.32
YDR048C	YDR048C	OSM1	P21375	501 aa	Known RBP	0.57	□□□□□ -2.32
YDR048C	YDR048C	HXT2	P23585	541 aa		0.57	□□□□□ -2.32
YDR048C	YDR048C	MNE1	P24720	663 aa		0.57	□□□□□ -2.32
YDR048C	YDR048C	VMA8	P32610	256 aa	Known RBP	0.57	□□□□□ -2.32
YDR048C	YDR048C	RPA34	P47006	233 aa	Predicted RBP	0.57	□□□□□ -2.32
YDR048C	YDR048C	RSC1	P53236	928 aa		0.57	□□□□□ -2.32
YDR048C	YDR048C	YPL247C	Q12523	523 aa		0.57	□□□□□ -2.32
YDR048C	YDR048C	YLL053C	P0CD98	152 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	TOM40	P23644	387 aa	Known RBP	0.56	□□□□□ -2.32
YDR048C	YDR048C	IMP1	P28627	190 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	TPO5	P36029	618 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	LRP1	P38801	184 aa	Known RBP	0.56	□□□□□ -2.32
YDR048C	YDR048C	YDR089W	P38966	869 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	GDI1	P39958	451 aa	Known RBP	0.56	□□□□□ -2.32
YDR048C	YDR048C	VAB2	P40003	282 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	TIF34	P40217	347 aa	Known RBP	0.56	□□□□□ -2.32
YDR048C	YDR048C	STE23	Q06010	1027 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	YLL007C	Q07799	665 aa		0.56	□□□□□ -2.32
YDR048C	YDR048C	NOT5	Q12514	560 aa	Predicted RBP	0.56	□□□□□ -2.32
YDR048C	YDR048C	PAN1	P32521	1480 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	RAD7	P06779	565 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	RPL16B	P26785	198 aa	Known RBP	0.55	□□□□□ -2.32
YDR048C	YDR048C	MCH2	P36032	473 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	ALP1	P38971	573 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	KRE29	P40026	464 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	COG7	P53195	279 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	YGR016W	P53209	190 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	SWT21	P53873	357 aa	Predicted RBP	0.55	□□□□□ -2.32
YDR048C	YDR048C	RVB1	Q03940	463 aa	Known RBP	0.55	□□□□□ -2.32
YDR048C	YDR048C	SNX41	Q04053	625 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	SXM1	Q04175	944 aa	Known RBP	0.55	□□□□□ -2.32
YDR048C	YDR048C	ISD11	Q6Q560	94 aa		0.55	□□□□□ -2.32
YDR048C	YDR048C	CDC7	P06243	507 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 182.9 ms