RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W SEH1P53011 349 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W RAI1P53063 387 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W MPA43P53583 542 aaPredicted RBP5.82□□□□□ -1.48
LDB16YCL005W YNR062CP53748 327 aa5.82□□□□□ -1.48
LDB16YCL005W IPK1Q06667 281 aa5.82□□□□□ -1.48
LDB16YCL005W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
LDB16YCL005W THP3Q12049 470 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W SEN1Q00416 2231 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W YEL009C-AA0A023PZF2 135 aa5.81□□□□□ -1.48
LDB16YCL005W YPK2P18961 677 aa5.81□□□□□ -1.48
LDB16YCL005W RIB7P33312 244 aa5.81□□□□□ -1.48
LDB16YCL005W NIC96P34077 839 aa5.81□□□□□ -1.48
LDB16YCL005W LST4P34239 828 aa5.81□□□□□ -1.48
LDB16YCL005W MTC2P34246 357 aa5.81□□□□□ -1.48
LDB16YCL005W GPX1P36014 167 aa5.81□□□□□ -1.48
LDB16YCL005W RRP4P38792 359 aaKnown RBP5.81□□□□□ -1.48
LDB16YCL005W NAB3P38996 802 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
LDB16YCL005W YJL218WP40892 196 aaKnown RBP5.81□□□□□ -1.48
LDB16YCL005W SHR5P41912 237 aa5.81□□□□□ -1.48
LDB16YCL005W GDS1P41913 522 aa5.81□□□□□ -1.48
LDB16YCL005W PXR1P53335 271 aaPredicted RBP5.81□□□□□ -1.48
LDB16YCL005W MKC7P53379 596 aa5.81□□□□□ -1.48
LDB16YCL005W GPN3Q06543 272 aa5.81□□□□□ -1.48
LDB16YCL005W FRE5Q08908 694 aa5.81□□□□□ -1.48
LDB16YCL005W YDL109CQ12103 647 aa5.81□□□□□ -1.48
LDB16YCL005W YOL114CQ12322 202 aa5.81□□□□□ -1.48
LDB16YCL005W PRP46Q12417 451 aaPredicted RBP5.81□□□□□ -1.48
LDB16YCL005W YOS9Q99220 542 aa5.81□□□□□ -1.48
LDB16YCL005W ARF1P11076 181 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W NCP1P16603 691 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W NUP1P20676 1076 aa5.8□□□□□ -1.48
LDB16YCL005W DAL82P21705 255 aa5.8□□□□□ -1.48
LDB16YCL005W CWH43P25618 953 aa5.8□□□□□ -1.48
LDB16YCL005W AHC2P25649 128 aa5.8□□□□□ -1.48
LDB16YCL005W PRE2P30656 287 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W SLC1P33333 303 aa5.8□□□□□ -1.48
LDB16YCL005W ECT1P33412 323 aa5.8□□□□□ -1.48
LDB16YCL005W HIS7P33734 552 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W SDS22P36047 338 aa5.8□□□□□ -1.48
LDB16YCL005W YKL071WP36086 256 aa5.8□□□□□ -1.48
LDB16YCL005W DTR1P38125 572 aa5.8□□□□□ -1.48
LDB16YCL005W YJL193WP39542 402 aa5.8□□□□□ -1.48
LDB16YCL005W RTT105P40063 208 aa5.8□□□□□ -1.48
LDB16YCL005W SDP1P40479 209 aa5.8□□□□□ -1.48
LDB16YCL005W HIS6P40545 261 aa5.8□□□□□ -1.48
LDB16YCL005W HXT9P40885 567 aa5.8□□□□□ -1.48
LDB16YCL005W CIN1P40987 1014 aa5.8□□□□□ -1.48
LDB16YCL005W SER2P42941 309 aa5.8□□□□□ -1.48
LDB16YCL005W OGG1P53397 376 aaPredicted RBP5.8□□□□□ -1.48
LDB16YCL005W RRN9P53437 365 aa5.8□□□□□ -1.48
LDB16YCL005W HXT11P54862 567 aa5.8□□□□□ -1.48
LDB16YCL005W TDA1Q03533 586 aa5.8□□□□□ -1.48
LDB16YCL005W EKI1Q03764 534 aa5.8□□□□□ -1.48
LDB16YCL005W PAL1Q05518 499 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W ENB1Q08299 606 aa5.8□□□□□ -1.48
LDB16YCL005W PEX27Q08580 376 aa5.8□□□□□ -1.48
LDB16YCL005W RCN2Q12044 265 aa5.8□□□□□ -1.48
LDB16YCL005W MCP1Q12106 302 aa5.8□□□□□ -1.48
LDB16YCL005W PAR32Q12515 295 aaKnown RBP5.8□□□□□ -1.48
LDB16YCL005W SUS1Q6WNK7 96 aa5.8□□□□□ -1.48
LDB16YCL005W SIR2P06700 562 aa5.79□□□□□ -1.48
LDB16YCL005W PRE7P23724 241 aaKnown RBP5.79□□□□□ -1.48
LDB16YCL005W YCL002CP25565 263 aa5.79□□□□□ -1.48
LDB16YCL005W TRS65P32893 560 aa5.79□□□□□ -1.48
LDB16YCL005W MBA1P38300 278 aa5.79□□□□□ -1.48
LDB16YCL005W MTC4P38335 694 aaKnown RBP5.79□□□□□ -1.48
LDB16YCL005W VBA2P38358 474 aaKnown RBP5.79□□□□□ -1.48
LDB16YCL005W YHK8P38776 514 aa5.79□□□□□ -1.48
LDB16YCL005W IPI1P38803 334 aaPredicted RBP5.79□□□□□ -1.48
LDB16YCL005W FET3P38993 636 aa5.79□□□□□ -1.48
LDB16YCL005W PHO90P39535 881 aa5.79□□□□□ -1.48
LDB16YCL005W SNO3P43544 222 aa5.79□□□□□ -1.48
LDB16YCL005W SFH5P47008 294 aa5.79□□□□□ -1.48
LDB16YCL005W BPL1P48445 690 aaPredicted RBP5.79□□□□□ -1.48
LDB16YCL005W VOA1P53262 265 aa5.79□□□□□ -1.48
LDB16YCL005W RHO5P53879 331 aaKnown RBP5.79□□□□□ -1.48
LDB16YCL005W MRPL22P53881 309 aa5.79□□□□□ -1.48
LDB16YCL005W PEX10Q05568 337 aa5.79□□□□□ -1.48
LDB16YCL005W CYK3Q07533 885 aa5.79□□□□□ -1.48
LDB16YCL005W COQ10Q08058 207 aa5.79□□□□□ -1.48
LDB16YCL005W YOL073CQ08232 322 aa5.79□□□□□ -1.48
LDB16YCL005W SFG1Q12507 346 aa5.79□□□□□ -1.48
LDB16YCL005W TAD3Q9URQ3 322 aa5.79□□□□□ -1.48
LDB16YCL005W CSF1Q12150 2958 aa5.79□□□□□ -1.48
LDB16YCL005W COX1P00401 534 aa5.78□□□□□ -1.48
LDB16YCL005W KIN28P06242 306 aa5.78□□□□□ -1.48
LDB16YCL005W EXG1P23776 448 aaKnown RBP5.78□□□□□ -1.48
LDB16YCL005W FUN26P31381 517 aa5.78□□□□□ -1.48
LDB16YCL005W MDH3P32419 343 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
LDB16YCL005W EMP70P32802 667 aa5.78□□□□□ -1.48
LDB16YCL005W MSN4P33749 630 aa5.78□□□□□ -1.48
LDB16YCL005W ZRT3P34240 503 aa5.78□□□□□ -1.48
LDB16YCL005W THI2P38141 450 aa5.78□□□□□ -1.48
LDB16YCL005W CHK1P38147 527 aa5.78□□□□□ -1.48
LDB16YCL005W MAL32P38158 584 aa5.78□□□□□ -1.48
LDB16YCL005W RPP1P38786 293 aa5.78□□□□□ -1.48
LDB16YCL005W YHR180WP38868 163 aa5.78□□□□□ -1.48
LDB16YCL005W MLH1P38920 769 aa5.78□□□□□ -1.48
LDB16YCL005W UME6P39001 836 aa5.78□□□□□ -1.48
LDB16YCL005W MIT1P40002 666 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms