RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 GPKOWQ92917 476 aaPredicted RBP eCLIP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 OSBP2Q969R2 916 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 E2F7Q96AV8 911 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 GPRASP2Q96D09 838 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 MTMR8Q96EF0 704 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 KIF1BPQ96EK5 621 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 EDEM2Q9BV94 578 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TRMT61BQ9BVS5 477 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 UBA5Q9GZZ9 404 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 BOLA2Q9H3K6 86 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PRORYQ9H606 182 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 AZI2Q9H6S1 392 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 C8orf33Q9H7E9 229 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 JMJD4Q9H9V9 463 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF334Q9HCZ1 680 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 JADE2Q9NQC1 790 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 EBF1Q9UH73 591 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SEPT9Q9UHD8 586 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 EVLQ9UI08 416 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 FAN1Q9Y2M0 1017 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RAXQ9Y2V3 346 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PTPRSQ13332 1948 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 MYO9AB2RTY4 2548 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 COL11A1P12107 1806 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CACNA1FO60840 1977 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 URB1O60287 2271 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 IGKV6D-21A0A0A0MT36 114 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC194A0A1B0GVG4 234 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 LNP1A1A4G5 178 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF197O14709 1029 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 NRP1O14786 923 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 MAGEB2O15479 319 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RNF113AO15541 343 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GPAA1O43292 621 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 SORBS3O60504 671 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RANBP6O60518 1105 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ATP9AO75110 1047 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ZC3H11AO75152 810 aaKnown RBP eCLIP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 NR1I2O75469 434 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 KRT38O76015 456 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 URODP06132 367 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC192P0DO97 292 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PSMC3P17980 439 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CCNE1P24864 410 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TMOD1P28289 359 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PHKA2P46019 1235 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 SLC11A1P49279 550 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 AK2P54819 239 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RIPPLY3P57055 190 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 IGBP1P78318 339 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 IRX4P78413 519 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RNASELQ05823 741 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 KARSQ15046 597 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PLCB4Q15147 1175 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TRIP6Q15654 476 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ALX1Q15699 326 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CDC37Q16543 378 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 QRICH1Q2TAL8 776 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 USP41Q3LFD5 358 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ASPRV1Q53RT3 343 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 NOMO2Q5JPE7 1267 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RRP12Q5JTH9 1297 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 COLEC12Q5KU26 742 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PCNX4Q63HM2 1172 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 HEATR6Q6AI08 1181 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TANGO2Q6ICL3 276 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF746Q6NUN9 644 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 SLC23A3Q6PIS1 610 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GLB1LQ6UWU2 654 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GET4Q7L5D6 327 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TMPRSS7Q7RTY8 843 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GRASPQ7Z6J2 395 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 MRPL10Q7Z7H8 261 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GLRX5Q86SX6 157 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 FAM228AQ86W67 206 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RALGPS2Q86X27 583 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TICAM2Q86XR7 235 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TRIM50Q86XT4 487 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PALB2Q86YC2 1186 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 MFSD6LQ8IWD5 586 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 FANCMQ8IYD8 2048 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 KBTBD3Q8NAB2 608 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 SPATA18Q8TC71 538 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 HELQQ8TDG4 1101 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 DEPDC1BQ8WUY9 529 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 CHMP4CQ96CF2 233 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PGBD4Q96DM1 585 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PCYT2Q99447 389 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 APOL6Q9BWW8 343 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 VN1R3Q9BXE9 311 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PLA2G2FQ9BZM2 168 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 INO80BQ9C086 356 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GPR88Q9GZN0 384 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 NAPBQ9H115 298 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 BRD9Q9H8M2 597 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TRPV4Q9HBA0 871 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 ZFP14Q9HCL3 533 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 EPB41L4AQ9HCS5 686 aaPredicted RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 UBN1Q9NPG3 1134 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms