RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 FAM83AQ86UY5 434 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 NCAPG2Q86XI2 1143 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 CALR3Q96L12 384 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 FAM81BQ96LP2 452 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 TIPINQ9BVW5 301 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 GANQ9H2C0 597 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 PCDHB4Q9Y5E5 795 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 PFASO15067 1338 aa9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 DDX60Q8IY21 1712 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-223ENST00000620507 RASSF10A6NK89 507 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ANKRD65E5RJM6 399 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 TTI1O43156 1089 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 TLR2O60603 784 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 NR3C2P08235 984 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 NOVP48745 357 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 HMGCS2P54868 508 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 RWDD2BP57060 319 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 SH2D3CQ8N5H7 860 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ZIM3Q96PE6 472 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 CBWD1Q9BRT8 395 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ATP6V0A4Q9HBG4 840 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 CNOT8Q9UFF9 292 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 PCDHGC5Q9Y5F6 944 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ASTN1O14525 1302 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 MYO1CO00159 1063 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 NOL4O94818 638 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ADCY8P40145 1251 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 CXCL9Q07325 125 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 SGO2Q562F6 1265 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 TAOK1Q7L7X3 1001 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 DDX42Q86XP3 938 aaKnown RBP eCLIP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 RANBP17Q9H2T7 1088 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 GPRC5CQ9NQ84 441 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 VAV3Q9UKW4 847 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 FRMPD4Q14CM0 1322 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 NKRFO15226 690 aaKnown RBP eCLIP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ZBTB7AO95365 584 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ABCD1P33897 745 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 SNX1Q13596 522 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ZNF564Q8TBZ8 553 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 NUP85Q9BW27 656 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 RTN2O75298 545 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ECEL1O95672 775 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 KRT19P08727 400 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 MYBL2P10244 700 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 CNGA1P29973 690 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ATP5DP30049 168 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 SUPT20HL1Q3ZLR7 823 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 RUNDC3BQ96NL0 473 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 THAP2Q9H0W7 228 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 OSGEPQ9NPF4 335 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 ANAPC7Q9UJX3 599 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
RBFOX1-223ENST00000620507 DOCK2Q92608 1830 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 PODXLO00592 558 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 P4HA2O15460 535 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 CTNND1O60716 968 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 LCA5LO95447 670 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 MNAT1P51948 309 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 EEPD1Q7L9B9 569 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ZBTB8OSQ8IWT0 167 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 GRK7Q8WTQ7 553 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ATG4CQ96DT6 458 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ATP6V1G3Q96LB4 118 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 GLIS2Q9BZE0 524 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 DEFB129Q9H1M3 183 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 HOXC10Q9NYD6 342 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ARAP2Q8WZ64 1704 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 DDX3XO00571 662 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 WNT10BO00744 389 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 MYCNP04198 464 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 RARRES1P49788 294 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 LIG3P49916 1009 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 EIF3BP55884 814 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 STXBP2Q15833 593 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 CASKIN2Q8WXE0 1202 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 ISCUQ9H1K1 167 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 KIAA1586Q9HCI6 787 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 MYH8P13535 1937 aa9.9□□□□□ -0.82
RBFOX1-223ENST00000620507 TGFB1I1O43294 461 aa9.9□□□□□ -0.83
RBFOX1-223ENST00000620507 THAP12O43422 761 aa9.9□□□□□ -0.83
RBFOX1-223ENST00000620507 DGAT1O75907 488 aa9.9□□□□□ -0.83
RBFOX1-223ENST00000620507 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms