RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 H0YCG3 227 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
VRK3-218ENST00000600031 F2P00734 622 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 GJB1P08034 283 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 CPT1AP50416 773 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 LAMTOR4Q0VGL1 99 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 ARHGAP29Q52LW3 1261 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
VRK3-218ENST00000600031 COL1A2P08123 1366 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 HTTP42858 3142 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 THSD7BQ9C0I4 1608 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 DUSP11O75319 330 aaKnown RBP16.57■□□□□ 0.24
VRK3-218ENST00000600031 EPB41P11171 864 aaKnown RBP16.57■□□□□ 0.24
VRK3-218ENST00000600031 CNGA1P29973 690 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 ADSSP30520 456 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 CASQ1P31415 396 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 MYBPC2Q14324 1141 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 TMEM174Q8WUU8 243 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 KCNN1Q92952 543 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 USP20Q9Y2K6 914 aa16.57■□□□□ 0.24
VRK3-218ENST00000600031 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.57■□□□□ 0.24
VRK3-218ENST00000600031 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 ADCY3O60266 1144 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 SRGAP2CP0DJJ0 459 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 PSMC2P35998 433 aaKnown RBP16.56■□□□□ 0.24
VRK3-218ENST00000600031 KLK7P49862 253 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 SNRPFP62306 86 aaKnown RBP16.56■□□□□ 0.24
VRK3-218ENST00000600031 MXD4Q14582 209 aaPredicted RBP16.56■□□□□ 0.24
VRK3-218ENST00000600031 GRIK4Q16099 956 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 FAM186BQ8IYM0 893 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 LINC01465Q8N7H1 131 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 LRRN4CLQ8ND94 238 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
VRK3-218ENST00000600031 AKR1B15C9JRZ8 316 aaPredicted RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 K7ERI5 159 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 MAGEB2O15479 319 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 EXOC3O60645 756 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 TADA3O75528 432 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 MYL3P08590 195 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 HOXD10P28358 340 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 CLCN6P51797 869 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 RBL2Q08999 1139 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 FSCN1Q16658 493 aaKnown RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 KIAA0753Q2KHM9 967 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 ZNF668Q96K58 619 aaPredicted RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 NAA15Q9BXJ9 866 aaKnown RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 FRMD4BQ9Y2L6 1034 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 SEPT4O43236 478 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 GYPCP04921 128 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 CCND3P30281 292 aaPredicted RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 ABCD1P33897 745 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
VRK3-218ENST00000600031 RDH13Q8NBN7 331 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 TMEM134Q9H6X4 195 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 SETD4Q9NVD3 440 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 SIP14410 1827 aa16.55■□□□□ 0.24
VRK3-218ENST00000600031 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 EDN1P05305 212 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 GJA9P57773 515 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 GNG11P61952 73 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 STRN3Q13033 797 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 MFSD10Q14728 455 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 PPFIBP1Q86W92 1011 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 ZNF296Q8WUU4 475 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 BICD1Q96G01 975 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 CARD6Q9BX69 1037 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
VRK3-218ENST00000600031 HAS3O00219 553 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 ATP8B1O43520 1251 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 PGK1P00558 417 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 SMIM10L2AP0DMW4 78 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 SMIM10L2BP0DMW5 78 aa16.54■□□□□ 0.24
VRK3-218ENST00000600031 SCP2P22307 547 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms