RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-214ENST00000574003 TRAIPQ9BWF2 469 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 ASAP2O43150 1006 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 GAS2O43903 313 aaKnown RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 ERLIN2O94905 339 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 POMCP01189 267 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.46e-8■□□□□ 8.3
RPAIN-214ENST00000574003 CDC25AP30304 524 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 RNASELQ05823 741 aaKnown RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 PTGDRQ13258 359 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 SMAD4Q13485 552 aaKnown RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 CSPP1Q1MSJ5 1256 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 TMC7Q7Z402 723 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 MRPL10Q7Z7H8 261 aaKnown RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 EXOC8Q8IYI6 725 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 FEZF2Q8TBJ5 459 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 POLR3CQ9BUI4 534 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-214ENST00000574003 VN1R3Q9BXE9 311 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 IPPQ9Y573 584 aa12.58□□□□□ -0.4
RPAIN-214ENST00000574003 C2orf71A6NGG8 1288 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 LRRIQ4A6NIV6 560 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 F8W810 466 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 ST18O60284 1047 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 GALTP07902 379 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 LIG1P18858 919 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 COL9A1P20849 921 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 GJB2P29033 226 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 PPM1AP35813 382 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 CCT6AP40227 531 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 RAB27AP51159 221 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 KRT17Q04695 432 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 TFDP1Q14186 410 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 MXD4Q14582 209 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 PADI6Q6TGC4 694 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 VPS52Q8N1B4 723 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 NACC1Q96RE7 527 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 GAD1Q99259 594 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 KIFC3Q9BVG8 833 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
RPAIN-214ENST00000574003 USP15Q9Y4E8 981 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-214ENST00000574003 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 NPTXRO95502 500 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 EYA4O95677 639 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 CXCL14O95715 111 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 EDN1P05305 212 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 SKIP12755 728 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 ITGA4P13612 1032 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 AKAP5P24588 427 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 RPA1P27694 616 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 TRAPPC10P48553 1259 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 ADHFE1Q8IWW8 467 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 SMRP1Q8NCR6 262 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 PGBD4Q96DM1 585 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 IGSF21Q96ID5 467 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 TBC1D32Q96NH3 1257 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 LRWD1Q9UFC0 647 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 DBR1Q9UK59 544 aaKnown RBP12.56□□□□□ -0.4
RPAIN-214ENST00000574003 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
RPAIN-214ENST00000574003 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 E9PMD0 336 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 PI4K2BG5E9Z4 385 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 WEE2P0C1S8 567 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 CYP11B2P19099 503 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 SP100P23497 879 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 MLH1P40692 756 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 SCNN1GP51170 649 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 COASYQ13057 564 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 KCNC3Q14003 757 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 ANKRD54Q6NXT1 300 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms