RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 LMBR1Q8WVP7 490 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ACAP3Q96P50 834 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 UPF2Q9HAU5 1272 aaKnown RBP8.34□□□□□ -1.07
CNOT1-222ENST00000570139 TOMM22Q9NS69 142 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 CLDND1Q9NY35 253 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 TCFL5Q9UL49 500 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 ARAP2Q8WZ64 1704 aa8.34□□□□□ -1.07
CNOT1-222ENST00000570139 SPEF2Q9C093 1822 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 AK9Q5TCS8 1911 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 ANKRD18BA2A2Z9 1011 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 RASSF10A6NK89 507 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA12O60330 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 GNAT1P11488 350 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 GPTP24298 496 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 LAPTM5Q13571 262 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 EPHA10Q5JZY3 1008 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 TTC22Q5TAA0 569 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 HHIPL2Q6UWX4 724 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 EP400NLQ6ZTU2 488 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 FRMD7Q6ZUT3 714 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 FAM214BQ7L5A3 538 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 FAM20CQ8IXL6 584 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 TEKT5Q96M29 485 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 UBL7Q96S82 380 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-222ENST00000570139 KCNJ15Q99712 375 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 CDADC1Q9BWV3 514 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 ZDHHC5Q9C0B5 715 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PPARGC1AQ9UBK2 798 aaKnown RBP8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PUF60Q9UHX1 559 aaKnown RBP8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA7Q9Y5G6 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA6Q9Y5G7 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 PCDHGA2Q9Y5H1 932 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 ABCC12Q96J65 1359 aa8.33□□□□□ -1.08
CNOT1-222ENST00000570139 NPHS1O60500 1241 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 H2AFYO75367 372 aaKnown RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 SPATA31C1P0DKV0 1188 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 KRT15P19012 456 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 SLC9A1P19634 815 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 CD40P25942 277 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 GPR3P46089 330 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 PDE1AP54750 535 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 GJA9P57773 515 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 ZNF280AP59817 542 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 HTRA3P83110 453 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 GRIK4Q16099 956 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 CYP27C1Q4G0S4 372 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 MBLAC2Q68D91 279 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 RNF111Q6ZNA4 994 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 TTLL11Q8NHH1 800 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 SLC35G2Q8TBE7 412 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 KCNF1Q9H3M0 494 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 SMURF1Q9HCE7 757 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 ACSS2Q9NR19 701 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 CCM2LQ9NUG4 571 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-222ENST00000570139 AP5S1Q9NUS5 200 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 DAAM1Q9Y4D1 1078 aa8.32□□□□□ -1.08
CNOT1-222ENST00000570139 EP400Q96L91 3159 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 ZNF609O15014 1411 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 C9orf172C9J069 976 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 EYA2O00167 538 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 NRDCO43847 1150 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 KDM1AO60341 852 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 CYP17A1P05093 508 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 ZBTB48P10074 688 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 BCL6P41182 706 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 KIF11P52732 1056 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 JAM2P57087 298 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 ADCY1Q08828 1119 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 SLC10A5Q5PT55 438 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 SUSD4Q5VX71 490 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 OGFOD3Q6PK18 319 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 ARHGAP36Q6ZRI8 547 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 OSTM1Q86WC4 334 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 NBPF5PQ86XG9 351 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 CPNE8Q86YQ8 564 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 MIER2Q8N344 545 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 GJA10Q969M2 543 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 TNIP3Q96KP6 325 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 NAP1L4Q99733 375 aaKnown RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 MAF1Q9H063 256 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 RNF38Q9H0F5 515 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 FAM204AQ9H8W3 233 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 ECHDC1Q9NTX5 307 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms