RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 FLOT1O75955 427 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 ICAM1P05362 532 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 ATP1A3P13637 1013 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 GLB1P16278 677 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 CIITAP33076 1130 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 EPHX2P34913 555 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 UBA7P41226 1012 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 HSD17B4P51659 736 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 NRG1Q02297 640 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-210ENST00000567654 SPIRE1Q08AE8 756 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 MRPL58Q14197 206 aaKnown RBP6.42□□□□□ -1.38
SF3B3-210ENST00000567654 PTPN21Q16825 1174 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 CCDC144BQ3MJ40 725 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 Q4G0T1 1027 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 TMEM119Q4V9L6 283 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 HSP90AA4PQ58FG1 418 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 TREML2Q5T2D2 321 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 RRAGBQ5VZM2 374 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 SARM1Q6SZW1 724 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 SULF2Q8IWU5 870 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 CPXCR1Q8N123 301 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 IQUBQ8NA54 791 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 SPC24Q8NBT2 197 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 IL31RAQ8NI17 732 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 GRIN3AQ8TCU5 1115 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 LPAR1Q92633 364 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 CDCA5Q96FF9 252 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 AK8Q96MA6 479 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 ZNF830Q96NB3 372 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-210ENST00000567654 RUSC1Q9BVN2 902 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 KCNF1Q9H3M0 494 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-210ENST00000567654 KBTBD4Q9NVX7 518 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 LRWD1Q9UFC0 647 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 NRBP1Q9UHY1 535 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 VAV3Q9UKW4 847 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 CCPG1Q9ULG6 757 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 GDAQ9Y2T3 454 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 AFG3L2Q9Y4W6 797 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 RPTORQ8N122 1335 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 EVPLQ92817 2033 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 GOLGA6L19H0YKK7 550 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GCOM1H8Y6P7 765 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 MED24O75448 989 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 CAVIN2O95810 425 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 PROCP04070 461 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 RPN1P04843 607 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 CYP3A4P08684 503 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 POLR2MP0CAP2 368 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 ALAS1P13196 640 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GCFC2P16383 781 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GATA4P43694 442 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 USP11P51784 963 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 STX17P56962 302 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GHRHRQ02643 423 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 DOC2BQ14184 412 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 DHX8Q14562 1220 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 CCDC85BQ15834 202 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GPR162Q16538 588 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 PRR16Q569H4 304 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 MOXD1Q6UVY6 613 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 KRT26Q7Z3Y9 468 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 TRIML1Q8N9V2 468 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 PRPF38AQ8NAV1 312 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 DCPSQ96C86 337 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 SPOCK3Q9BQ16 436 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 CORO1BQ9BR76 489 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GLT8D2Q9H1C3 349 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 R3HDMLQ9H3Y0 253 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 TAF1DQ9H5J8 278 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 CCDC86Q9H6F5 360 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 AS3MTQ9HBK9 375 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 PICK1Q9NRD5 415 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 HOMER2Q9NSB8 354 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 FANCLQ9NW38 375 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 ZNF214Q9UL59 606 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 ADAMTS5Q9UNA0 930 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 MRPL11Q9Y3B7 192 aaKnown RBP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B3-210ENST00000567654 FRMPD4Q14CM0 1322 aa6.41□□□□□ -1.38
SF3B3-210ENST00000567654 GLTPD2A6NH11 291 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MYMKA6NI61 221 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 BECN2A8MW95 431 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 E9PMD0 336 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TRAF5O00463 557 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 VWA5AO00534 786 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 IKBKBO14920 756 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 FOSP01100 380 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 CYP11A1P05108 521 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 ARP10275 920 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 DRD2P14416 443 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PTGS1P23219 599 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PMS1P54277 932 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 USP14P54578 494 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MRPS9P82933 396 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MYL5Q02045 173 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PPP2R3AQ06190 1150 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MOGSQ13724 837 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms