RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SEPT11Q9NVA2 429 aaKnown RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 DMAC2Q9NW81 257 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 CTTNBP2NLQ9P2B4 639 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 TMX2Q9Y320 296 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 KIF13BQ9NQT8 1826 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 LTBP4Q8N2S1 1624 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 RGS16O15492 202 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 PPFIA2O75334 1257 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 PSMD10O75832 226 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 GAS8O95995 478 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 FGGP02679 453 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 VIL1P09327 827 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 VAMP7P51809 220 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 DHX9Q08211 1270 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 DDR1Q08345 913 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 NR1H3Q13133 447 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 PRPF4BQ13523 1007 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 ECM1Q16610 540 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 USH1GQ495M9 461 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 TTMPQ5BVD1 217 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 KIAA1755Q5JYT7 1200 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 TRIM72Q6ZMU5 477 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 MIER3Q7Z3K6 550 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 METTL3Q86U44 580 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 SLC30A5Q8TAD4 765 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 SLC35G2Q8TBE7 412 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF473Q8WTR7 871 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 HDAC7Q8WUI4 952 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 GJA10Q969M2 543 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 HOOK2Q96ED9 719 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 MS4A14Q96JA4 679 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 RNPC3Q96LT9 517 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 CCT8L2Q96SF2 557 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
ATXN3-249ENST00000564606 AGPAT3Q9NRZ7 376 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 PCYOX1Q9UHG3 505 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 TFR2Q9UP52 801 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 STXBP5LQ9Y2K9 1186 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 COL4A1P02462 1669 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 ASTN1O14525 1302 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 LOXHD1Q8IVV2 1947 aa8.23□□□□□ -1.09
ATXN3-249ENST00000564606 CFAP73A6NFT4 308 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF233A6NK53 670 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 BHMG1C9JSJ3 638 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 K7ENM7 598 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MEIS1O00470 390 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 DDX3XO00571 662 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ASAP2O43150 1006 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 CFBP00751 764 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 KRT14P02533 472 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 TFRCP02786 760 aaKnown RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ASNSP08243 561 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 GSTA1P08263 222 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PLS3P13797 630 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ITIH2P19823 946 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 CTNNA2P26232 953 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MXI1P50539 228 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PDE6CP51160 858 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 SCNN1DP51172 638 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MNAT1P51948 309 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PMS2P54278 862 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 RWDD2BP57060 319 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 KRT76Q01546 638 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MAPK7Q13164 816 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PDCLQ13371 301 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ITIH4Q14624 930 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PLS1Q14651 629 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 LIN9Q5TKA1 542 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 NAA35Q5VZE5 725 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 GSPT2Q8IYD1 628 aaKnown RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 RIBC1Q8N443 379 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MYCBPAPQ8TBZ2 947 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PXYLP1Q8TE99 480 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 FAM151AQ8WW52 585 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 LPAR1Q92633 364 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 CHMP6Q96FZ7 201 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 CDHR1Q96JP9 859 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 IFT74Q96LB3 600 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 CSRNP1Q96S65 589 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MXRA8Q9BRK3 442 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 MOV10L1Q9BXT6 1211 aaKnown RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 RANBP17Q9H2T7 1088 aaKnown RBP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 ANKEF1Q9NU02 776 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms