RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PCDHA12Q9UN75 941 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 PPME1Q9Y570 386 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 PCDHB2Q9Y5E7 798 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 IRAK3Q9Y616 596 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 MUC6Q6W4X9 2439 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 CFAP47Q6ZTR5 3102 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DOCK6Q96HP0 2047 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DOCK8Q8NF50 2099 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 POTEMA6NI47 508 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 TTLL13PA6NNM8 815 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 ASAP2O43150 1006 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 MED24O75448 989 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 EDN1P05305 212 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 SRGAP2CP0DJJ0 459 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 XRCC6P12956 609 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 XBP1P17861 261 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 NCLP19338 710 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 GLRA2P23416 452 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 PPM1AP35813 382 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 SLC11A1P49279 550 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 RARRES1P49788 294 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 POLGP54098 1239 aaPredicted RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 PTENP60484 403 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 POU5F1BQ06416 359 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 CAPSQ13938 189 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 XKR9Q5GH70 373 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 SPOUT1Q5T280 376 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 KANK3Q6NY19 840 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 HFE2Q6ZVN8 426 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 CATSPER4Q7RTX7 472 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 SRGAP1Q7Z6B7 1085 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 DDX53Q86TM3 631 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 CATSPER3Q86XQ3 398 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 TPH2Q8IWU9 490 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 MICAL1Q8TDZ2 1067 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 AUTS2Q8WXX7 1259 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 SLC7A3Q8WY07 619 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 WASF1Q92558 559 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 EDAQ92838 391 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 JPH2Q9BR39 696 aaPredicted RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 PHF7Q9BWX1 381 aaPredicted RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 EIF2AQ9BY44 585 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 MRPL9Q9BYD2 267 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 NFKBIZQ9BYH8 718 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 INO80BQ9C086 356 aaPredicted RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 CXCL16Q9H2A7 254 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 TTC12Q9H892 705 aaPredicted RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 NGRNQ9NPE2 291 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 ANKEF1Q9NU02 776 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 MARCH5Q9NX47 278 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 PIN4Q9Y237 131 aaKnown RBP6.19□□□□□ -1.42
SMAD3-209ENST00000558894 FAM50BQ9Y247 325 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 HCFC2Q9Y5Z7 792 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 NOTCH4Q99466 2003 aa6.19□□□□□ -1.42
SMAD3-209ENST00000558894 ANK1P16157 1881 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 A0A1B0GUA9 196 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 F8W810 466 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 B4GALT5O43286 388 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 GAS2O43903 313 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 NEMFO60524 1076 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 DKC1O60832 514 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 DGAT1O75907 488 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PAPLNO95428 1278 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 NEFLP07196 543 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 CTSAP10619 480 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 EPCAMP16422 314 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 ARF4P18085 180 aaPredicted RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TECP42680 631 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TXKP42681 527 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TOB1P50616 345 aaPredicted RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 RAB27AP51159 221 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 GUCY1B3Q02153 619 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 KRT17Q04695 432 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 DSC1Q08554 894 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PTPN14Q15678 1187 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 NAB2Q15742 525 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 IL17AQ16552 155 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 CALCRLQ16602 461 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 ECM1Q16610 540 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TWF2Q6IBS0 349 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 LLGL2Q6P1M3 1020 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 OTUD6AQ7L8S5 288 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TAS1R1Q7RTX1 841 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 BMP8AQ7Z5Y6 402 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 EXOC8Q8IYI6 725 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 COLGALT2Q8IYK4 626 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 ABI1Q8IZP0 508 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 RNF149Q8NC42 400 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 FBXO18Q8NFZ0 1043 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PIGOQ8TEQ8 1089 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 TCP11Q8WWU5 503 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PSPC1Q8WXF1 523 aaKnown RBP6.18□□□□□ -1.42
SMAD3-209ENST00000558894 RSPH1Q8WYR4 309 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 BSNDQ8WZ55 320 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 PPP2R3CQ969Q6 453 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 ASIC4Q96FT7 647 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 CPB2Q96IY4 423 aa6.18□□□□□ -1.42
SMAD3-209ENST00000558894 SCLT1Q96NL6 688 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms