RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 JAG1P78504 1218 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 DENND2CQ68D51 928 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SLFN12LQ6IEE8 588 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 TTI2Q6NXR4 508 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 GPD1LQ8N335 351 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 PRPF31Q8WWY3 499 aaKnown RBP10.26□□□□□ -0.77
TTC39C-203ENST00000540918 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 CAPN11Q9UMQ6 739 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 RGPD5Q99666 1765 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 A0A0U1RQJ8 604 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 PDHXO00330 501 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 TBX3O15119 743 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SLC4A1P02730 911 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 POLR2BP30876 1174 aaKnown RBP10.26□□□□□ -0.77
TTC39C-203ENST00000540918 CACNB2Q08289 660 aaPredicted RBP10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ITKQ08881 620 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ECM1Q16610 540 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SGO2Q562F6 1265 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 RFX6Q8HWS3 928 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 MRPL4Q9BYD3 311 aaKnown RBP10.26□□□□□ -0.77
TTC39C-203ENST00000540918 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 AGAP1Q9UPQ3 857 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SNX24Q9Y343 169 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SNX9Q9Y5X1 595 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 KRT1P04264 644 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 GPC3P51654 580 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SPOPLQ6IQ16 392 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 KIAA1841Q6NSI8 718 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 PDXDC1Q6P996 788 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SCN4BQ8IWT1 228 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ZBTB10Q96DT7 871 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ACP6Q9NPH0 428 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 FAM49BQ9NUQ9 324 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 POLIQ9UNA4 740 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 MAD1L1Q9Y6D9 718 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ASB14A6NK59 587 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 POC1B-GALNT4F8VUJ3 575 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 GNA15P30679 374 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 NPTX2P47972 431 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 IFNAR2P48551 515 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 BPIFB4P59827 614 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 TREML2Q5T2D2 321 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 OTOP1Q7RTM1 612 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 PNMA8AQ86V59 439 aaPredicted RBP10.26□□□□□ -0.77
TTC39C-203ENST00000540918 RAET1EQ8TD07 263 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 SCFD2Q8WU76 684 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 TCP11Q8WWU5 503 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 IQCDQ96DY2 449 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 BCAS3Q9H6U6 928 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 LRRC4Q9HBW1 653 aa10.26□□□□□ -0.77
TTC39C-203ENST00000540918 ADAMTSL3P82987 1691 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 GOLGA8MH3BSY2 632 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 GJB1P08034 283 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 FDX1P10109 184 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 ITGB5P18084 799 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 DSG3P32926 999 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 CYP2C19P33261 490 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 YWHAEP62258 255 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 ERVK-24P63145 666 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 RRP1BQ14684 758 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 C15orf52Q6ZUT6 534 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 ACSF2Q96CM8 615 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 ZBTB45Q96K62 511 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 CYP26B1Q9NR63 512 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 SEL1LQ9UBV2 794 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 NFKBIEO00221 500 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 BNIP3LO60238 219 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 GABPAQ06546 454 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 MYO1EQ12965 1108 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 ORC2Q13416 577 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 HADHQ16836 314 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 C10orf76Q5T2E6 689 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 TEX2Q8IWB9 1127 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 RABGGTAQ92696 567 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 PACSIN1Q9BY11 444 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 LACRTQ9GZZ8 138 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 STIM2Q9P246 746 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 TSKSQ9UJT2 592 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 MRPL42Q9Y6G3 142 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 A0A087X0T9 212 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
TTC39C-203ENST00000540918 PHLPP1O60346 1717 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 FAM228BP0C875 321 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 CETPP11597 493 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 KCPQ6ZWJ8 1503 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 BTBD6Q96KE9 485 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 NUP85Q9BW27 656 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 HEY1Q9Y5J3 304 aa10.25□□□□□ -0.77
TTC39C-203ENST00000540918 CYP2C9P11712 490 aa10.24□□□□□ -0.77
TTC39C-203ENST00000540918 KLRC1P26715 233 aa10.24□□□□□ -0.77
TTC39C-203ENST00000540918 GALCP54803 685 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms