RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 CELF4Q9BZC1 486 aaKnown RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 HMGB1P1B2RPK0 211 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 ZRANB2O95218 330 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■■■ 42
RAD50-209ENST00000533482 HOXA7P31268 230 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 SFNP31947 248 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 TBX2Q13207 712 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 BEND6Q5SZJ8 279 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 VPS52Q8N1B4 723 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 SREK1Q8WXA9 508 aaKnown RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 ELAC2Q9BQ52 826 aaKnown RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 NFAT5O94916 1531 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 MAN1A1P33908 653 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 STAT5BP51692 787 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 KRT39Q6A163 491 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 RILPQ96NA2 401 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 TXNP10599 105 aaKnown RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 HSPA6P17066 643 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 ANKS1AQ92625 1134 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 TCHHQ07283 1943 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 GOLGA8MH3BSY2 632 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 TRIM66O15016 1216 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 RAD51CO43502 376 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 PCK1P35558 622 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 SNX16P57768 344 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 ALCAMQ13740 583 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 IL17AQ16552 155 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 SPOUT1Q5T280 376 aaKnown RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 P3H4Q92791 437 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 RBAKQ9NYW8 714 aaPredicted RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 A0A087WUV0 522 aaPredicted RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 ZBTB39O15060 712 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 DACT2Q5SW24 774 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 KLHDC7AQ5VTJ3 777 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 NUGGCQ68CJ6 796 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 STMN2Q93045 179 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 PNMA5Q96PV4 448 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 STAMBPO95630 424 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 NEDD9Q14511 834 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 LRRC14Q15048 493 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 ZNF667Q5HYK9 610 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 HACE1Q8IYU2 909 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 FAM118BQ9BPY3 351 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 HSPBP1Q9NZL4 362 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
RAD50-209ENST00000533482 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
RAD50-209ENST00000533482 TARSL2A2RTX5 802 aaKnown RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 LRRIQ3A6PVS8 624 aaPredicted RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 MIF4GDA9UHW6 222 aaKnown RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 KCNJ1P48048 391 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 TMEM62Q0P6H9 643 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 EXOC1LA0A1B0GW35 172 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 PIK3R2O00459 728 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 SAT1P21673 171 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 SLFN12LQ6IEE8 588 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 ERICH1Q86X53 443 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 RSRC1Q96IZ7 334 aaKnown RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 L1RE1Q9UN81 338 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 HIBCHQ6NVY1 386 aaPredicted RBP13.29□□□□□ -0.28
RAD50-209ENST00000533482 FAM47EQ6ZV65 393 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 LRRC8CQ8TDW0 803 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 MMP19Q99542 508 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 KLHL11Q9NVR0 708 aa13.29□□□□□ -0.28
RAD50-209ENST00000533482 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 H3BQF6 201 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 WNT10BO00744 389 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 MMEP08473 750 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 SLMAPQ14BN4 828 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 NAB2Q15742 525 aa13.28□□□□□ -0.28
RAD50-209ENST00000533482 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
RAD50-209ENST00000533482 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms