RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 PCYT2Q99447 389 aa18.79■□□□□ 0.6
PCDHA6-202ENST00000527624 CLEC11AQ9Y240 323 aa18.79■□□□□ 0.6
PCDHA6-202ENST00000527624 MAP2K7O14733 419 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 HNRNPDLO14979 420 aaKnown RBP18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 ZNF185O15231 689 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 RHOXF2BP0C7M4 288 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 CYP2C8P10632 490 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 PRKCIP41743 596 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 KCTD2Q14681 263 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 PHLDB3Q6NSJ2 640 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 LMO3Q8TAP4 145 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 CCDC127Q96BQ5 260 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 HVCN1Q96D96 273 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 NOX5Q96PH1 765 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 MMP19Q99542 508 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 RHOXF2Q9BQY4 288 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 STK33Q9BYT3 514 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 USP20Q9Y2K6 914 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 EVI5O60447 810 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 ARIH2O95376 493 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 KLRC1P26715 233 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 SOX5P35711 763 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 NEDD9Q14511 834 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 SMC1AQ14683 1233 aaKnown RBP18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 ARHGAP44Q17R89 818 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 LDLRAD1Q5T700 205 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 MAP1SQ66K74 1059 aaPredicted RBP18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 SLC10A4Q96EP9 437 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 BICD1Q96G01 975 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 ARID2Q68CP9 1835 aa18.78■□□□□ 0.6
PCDHA6-202ENST00000527624 IGKV6D-21A0A0A0MT36 114 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 IQCA1LA6NCM1 817 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 TUBBP07437 444 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 RTP1P59025 263 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 SNAPC2Q13487 334 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 TAS1R3Q7RTX0 852 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 POMGNT1Q8WZA1 660 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 MMS19Q96T76 1030 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 GPR88Q9GZN0 384 aa18.77■□□□□ 0.6
PCDHA6-202ENST00000527624 NCK2O43639 380 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 ERLIN1O75477 346 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 FERP16591 822 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 TCF7P36402 384 aaPredicted RBP18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 NAB2Q15742 525 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 ASAP3Q8TDY4 903 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 PSMB7Q99436 277 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 POP1Q99575 1024 aaKnown RBP18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 ARHGAP28Q9P2N2 729 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 NAGPAQ9UK23 515 aa18.77■□□□□ 0.59
PCDHA6-202ENST00000527624 STAT5BP51692 787 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 VSNL1P62760 191 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 CETN1Q12798 172 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 METTL7BQ6UX53 244 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 FBXO16Q8IX29 292 aaPredicted RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 TMEM117Q9H0C3 514 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 DHX33Q9H6R0 707 aaKnown RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 FAM170AA1A519 330 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 MAPK13O15264 365 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 N4BP1O75113 896 aaKnown RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 MXI1P50539 228 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 MAP2K1Q02750 393 aaPredicted RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 ALKBH5Q6P6C2 394 aaKnown RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 ARHGEF19Q8IW93 802 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 RNF10Q8N5U6 811 aaKnown RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 CAGE1Q8TC20 777 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 PORCNQ9H237 461 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 EFCC1Q9HA90 598 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 ABCB6Q9NP58 842 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 UBE2TQ9NPD8 197 aaPredicted RBP18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 L1RE1Q9UN81 338 aa18.76■□□□□ 0.59
PCDHA6-202ENST00000527624 MYH9P35579 1960 aaKnown RBP18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 TGFB3P10600 412 aa18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 VPS36Q86VN1 386 aa18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 TRIM50Q86XT4 487 aa18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 NIFKQ9BYG3 293 aaKnown RBP18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 TOPORSQ9NS56 1045 aaPredicted RBP18.75■□□□□ 0.59
PCDHA6-202ENST00000527624 DNAJC25-GNG10A0A024R161 153 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 LRRIQ4A6NIV6 560 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 DDX3XO00571 662 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 POLR3GO15318 223 aaPredicted RBP18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 PALMO75781 387 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 GLRA2P23416 452 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 MARK3P27448 753 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 CXCR5P32302 372 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 FAM160B1Q5W0V3 765 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 WDR93Q6P2C0 686 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 HDXQ7Z353 690 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 SEPT1Q8WYJ6 367 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 CEP89Q96ST8 783 aa18.74■□□□□ 0.59
PCDHA6-202ENST00000527624 MPHOSPH6Q99547 160 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms