RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 LRRFIP1Q32MZ4 808 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ANO1Q5XXA6 986 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ANKRD33Q7Z3H0 272 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 CDH24Q86UP0 819 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 VPS37DQ86XT2 251 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 STK11IPQ8N1F8 1099 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ANKRD13CQ8N6S4 541 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 C19orf47Q8N9M1 422 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 XAGE3Q8WTP9 111 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 KIF2CQ99661 725 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ZSWIM4Q9H7M6 989 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 KLHL3Q9UH77 587 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ADAMTS6Q9UKP5 1117 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 INPP5FQ9Y2H2 1132 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 EPPK1P58107 5090 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 SIP14410 1827 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ERVV-2B6SEH9 535 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 LRRN2O75325 713 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 WNT11O96014 354 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ESR1P03372 595 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 DCNP07585 359 aaKnown RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 RETP07949 1114 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 CD8BP10966 210 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ITPKBP27987 946 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 HOXC9P31274 260 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 CD96P40200 585 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 BNIP3Q12983 259 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 SF3A2Q15428 464 aaKnown RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 TIGD5Q53EQ6 642 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 HEATR6Q6AI08 1181 aaKnown RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 SDE2Q6IQ49 451 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 PPFIBP1Q86W92 1011 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ERO1BQ86YB8 467 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ABI1Q8IZP0 508 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 FAM169BQ8N8A8 192 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 HRASLS5Q96KN8 279 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 TOX2Q96NM4 488 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 FCRL3Q96P31 734 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 TM9SF2Q99805 663 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 PIF1Q9H611 641 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ERVK-5Q9HDB9 667 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 EFR3BQ9Y2G0 817 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 PCDHGA2Q9Y5H1 932 aa4.1□□□□□ -1.75
CSDE1-209ENST00000525132 URB1O60287 2271 aaKnown RBP4.1□□□□□ -1.75
CSDE1-209ENST00000525132 ARAP2Q8WZ64 1704 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 SCN9AQ15858 1988 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 AHCTF1Q8WYP5 2266 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 SHISA3A0PJX4 238 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 KIF28PB7ZC32 967 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 NCK2O43639 380 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 ITGB5P18084 799 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 ITIH2P19823 946 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 CASP7P55210 303 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 ERVK-21P61565 698 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 EGFLAMQ63HQ2 1017 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 LAIR1Q6GTX8 287 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 RUFY4Q6ZNE9 571 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 HERC6Q8IVU3 1022 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 IFNL2Q8IZJ0 200 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 ZBTB44Q8NCP5 570 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 MOCOSQ96EN8 888 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 MSLNLQ96KJ4 702 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 HSPA12BQ96MM6 686 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 HDAC8Q9BY41 377 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 NSUN3Q9H649 340 aaKnown RBP4.09□□□□□ -1.75
CSDE1-209ENST00000525132 VEZTQ9HBM0 779 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 MBNL3Q9NUK0 354 aaKnown RBP4.09□□□□□ -1.75
CSDE1-209ENST00000525132 CTNNA3Q9UI47 895 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 STRIP2Q9ULQ0 834 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 SLC5A6Q9Y289 635 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 USP15Q9Y4E8 981 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-209ENST00000525132 RTL1A6NKG5 1358 aa4.09□□□□□ -1.75
CSDE1-209ENST00000525132 PLXNB2O15031 1838 aa4.09□□□□□ -1.76
CSDE1-209ENST00000525132 TLN2Q9Y4G6 2542 aa4.09□□□□□ -1.76
CSDE1-209ENST00000525132 CUBNO60494 3623 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 GNAT3A8MTJ3 354 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 WASH4PA8MWX3 477 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 PAX4O43316 350 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 MSCO60682 206 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 FAM155BO75949 473 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 STK10O94804 968 aaKnown RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 GUCY2CP25092 1073 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 IL12RB1P42701 662 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 NASPP49321 788 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 HYAL1Q12794 435 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 PPIL2Q13356 520 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 PTPROQ16827 1216 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF528Q3MIS6 628 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 DIEXFQ68CQ4 756 aaKnown RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 CCDC81Q6ZN84 652 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 TGS1Q96RS0 853 aaKnown RBP4.08□□□□□ -1.76
CSDE1-209ENST00000525132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.08□□□□□ -1.763e-6■■□□□ 12
CSDE1-209ENST00000525132 SP110Q9HB58 689 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 ATP13A1Q9HD20 1204 aa4.08□□□□□ -1.76
CSDE1-209ENST00000525132 GAR1Q9NY12 217 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms