RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 TCP11Q8WWU5 503 aa23.28■■□□□ 1.32
PABPC1-218ENST00000521865 PRRX2Q99811 253 aa23.28■■□□□ 1.32
PABPC1-218ENST00000521865 DHX33Q9H6R0 707 aaKnown RBP23.28■■□□□ 1.32
PABPC1-218ENST00000521865 ZSWIM4Q9H7M6 989 aa23.28■■□□□ 1.32
PABPC1-218ENST00000521865 TRIOO75962 3097 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 C2CD4DB7Z1M9 353 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 ERLIN2O94905 339 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 EPCAMP16422 314 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 ATAT1Q5SQI0 421 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 CABP7Q86V35 215 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 ZNF280BQ86YH2 543 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 TPH2Q8IWU9 490 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 KREMEN2Q8NCW0 462 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 ASIC4Q96FT7 647 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 MINDY3Q9H8M7 445 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 DBR1Q9UK59 544 aaKnown RBP23.27■■□□□ 1.32
PABPC1-218ENST00000521865 IRAK3Q9Y616 596 aa23.27■■□□□ 1.32
PABPC1-218ENST00000521865 PIEZO1Q92508 2521 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 ASAP2O43150 1006 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 GAS2O43903 313 aaKnown RBP23.26■■□□□ 1.31
PABPC1-218ENST00000521865 ALDH2P05091 517 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 SSBP05455 408 aaKnown RBP eCLIP23.26■■□□□ 1.31
PABPC1-218ENST00000521865 KRT2P35908 639 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 ANKRD1Q15327 319 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 EARS2Q5JPH6 523 aaKnown RBP23.26■■□□□ 1.31
PABPC1-218ENST00000521865 AGMOQ6ZNB7 445 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 CCDC43Q96MW1 224 aaKnown RBP23.26■■□□□ 1.31
PABPC1-218ENST00000521865 MTRQ99707 1265 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 KANSL3Q9P2N6 904 aa23.26■■□□□ 1.31
PABPC1-218ENST00000521865 FAM205CA6NFA0 338 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 POMCP01189 267 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 NEFLP07196 543 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 NR5A1Q13285 461 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 MTMR3Q13615 1198 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 KANK3Q6NY19 840 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 MRPL10Q7Z7H8 261 aaKnown RBP23.25■■□□□ 1.31
PABPC1-218ENST00000521865 FERMT3Q86UX7 667 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 PPFIBP1Q86W92 1011 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 TDRD5Q8NAT2 981 aaKnown RBP23.25■■□□□ 1.31
PABPC1-218ENST00000521865 EMILIN2Q9BXX0 1053 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 STK39Q9UEW8 545 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 SORCS3Q9UPU3 1222 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 FAN1Q9Y2M0 1017 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 CNTNAP2Q9UHC6 1331 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 WDR81Q562E7 1941 aa23.25■■□□□ 1.31
PABPC1-218ENST00000521865 WDFY4Q6ZS81 3184 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 ZBTB39O15060 712 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 B4GALT3O60512 393 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 DDHD2O94830 711 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 CTDNEP1O95476 244 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 ITGA4P13612 1032 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 KLRC2P26717 231 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 HOXA11P31270 313 aaPredicted RBP23.24■■□□□ 1.31
PABPC1-218ENST00000521865 AK2P54819 239 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 VCPP55072 806 aaKnown RBP23.24■■□□□ 1.31
PABPC1-218ENST00000521865 NCBP1Q09161 790 aaKnown RBP23.24■■□□□ 1.31
PABPC1-218ENST00000521865 PTPN14Q15678 1187 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 UBXN11Q5T124 520 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 KIAA1841Q6NSI8 718 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 TMC5Q6UXY8 1006 aa23.24■■□□□ 1.31
PABPC1-218ENST00000521865 INO80B-WBP1J3KQ70 363 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 AFF1P51825 1210 aaKnown RBP23.23■■□□□ 1.31
PABPC1-218ENST00000521865 NECAB1Q8N987 351 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 CNNM3Q8NE01 707 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 SLC22A17Q8WUG5 538 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 TMEM175Q9BSA9 504 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 VN1R3Q9BXE9 311 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 UBN1Q9NPG3 1134 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 PCDHA12Q9UN75 941 aa23.23■■□□□ 1.31
PABPC1-218ENST00000521865 NRP1O14786 923 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
PABPC1-218ENST00000521865 AVPR2P30518 371 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 SPIRE1Q08AE8 756 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 TFDP1Q14186 410 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 MXD4Q14582 209 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-218ENST00000521865 CALCRLQ16602 461 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 UBALD2Q8IYN6 164 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 PHOX2BQ99453 314 aa23.22■■□□□ 1.31
PABPC1-218ENST00000521865 EIF2AK1Q9BQI3 630 aaKnown RBP23.22■■□□□ 1.31
PABPC1-218ENST00000521865 MRPL17Q9NRX2 175 aaKnown RBP23.22■■□□□ 1.31
PABPC1-218ENST00000521865 PRG3Q9Y2Y8 225 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-218ENST00000521865 ZNF318Q5VUA4 2279 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 C2CD2LO14523 706 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 SLITRK3O94933 977 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 BRD1O95696 1058 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 PDGFBP01127 241 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-218ENST00000521865 OR1G1P47890 313 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 FOSBP53539 338 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 ANAPC15P60006 121 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 NOTUMQ6P988 496 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 PLCD3Q8N3E9 789 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 CPB2Q96IY4 423 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 KLHL5Q96PQ7 755 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 SFXN1Q9H9B4 322 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 LIMD1Q9UGP4 676 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 IPPQ9Y573 584 aa23.21■■□□□ 1.31
PABPC1-218ENST00000521865 TSPAN1O60635 241 aa23.2■■□□□ 1.3
PABPC1-218ENST00000521865 URODP06132 367 aa23.2■■□□□ 1.3
PABPC1-218ENST00000521865 ASGR2P07307 311 aa23.2■■□□□ 1.3
PABPC1-218ENST00000521865 CNPP09543 421 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms