RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 GJA10Q969M2 543 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 HVCN1Q96D96 273 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 IWS1Q96ST2 819 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 PDCD2LQ9BRP1 358 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 STRA6Q9BX79 667 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 UNC45AQ9H3U1 944 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 RPAP3Q9H6T3 665 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 AGO4Q9HCK5 861 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 LUC7LQ9NQ29 371 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 KCNH7Q9NS40 1196 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 ANKEF1Q9NU02 776 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 ARMCX3Q9UH62 379 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 TCEAL9Q9UHQ7 104 aa7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 ZNF215Q9UL58 517 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTNNA1-228ENST00000521640 SBF1O95248 1867 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ASTN1O14525 1302 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 SMCHD1A6NHR9 2005 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CTAGE9A4FU28 777 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ARHGEF35A5YM69 484 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RNF225M0QZC1 329 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NFIBO00712 420 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DHX15O43143 795 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 USO1O60763 962 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 COBLO75128 1261 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TADA3O75528 432 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 URI1O94763 535 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 GFPT2O94808 682 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ARP10275 920 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 EPB41P11171 864 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ALAS1P13196 640 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 IGFBP4P22692 258 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NR2F2P24468 414 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CCND2P30279 289 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 QARSP47897 775 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 VAV2P52735 878 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PSMC6P62333 389 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RASSF7Q02833 373 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CYP4A11Q02928 519 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 MTMR1Q13613 665 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 HSP90AA2PQ14568 343 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 COG2Q14746 738 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PGM5Q15124 567 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PPP2R5AQ15172 486 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 SPA17Q15506 151 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TBC1D10BQ4KMP7 808 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NBPF12Q5TAG4 269 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TMEM164Q5U3C3 297 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ZNF385CQ66K41 422 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PDXDC1Q6P996 788 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RNF207Q6ZRF8 634 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CATSPERGQ6ZRH7 1159 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 MIER3Q7Z3K6 550 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NLRX1Q86UT6 975 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CREBRFQ8IUR6 639 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 SMAP1Q8IYB5 467 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 MNS1Q8NEH6 495 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TBC1D5Q92609 795 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DYDC2Q96IM9 177 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RPGRIP1Q96KN7 1286 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CCDC42Q96M95 316 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 INPP4AQ96PE3 977 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 WDR24Q96S15 920 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 WRNIP1Q96S55 665 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 FIZ1Q96SL8 496 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NAPGQ99747 312 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 LXNQ9BS40 222 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DESI2Q9BSY9 194 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 RUSC1Q9BVN2 902 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CFHR5Q9BXR6 569 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TEX13BQ9BXU2 312 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TMEM206Q9H813 350 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 NHEJ1Q9H9Q4 299 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 C17orf75Q9HAS0 396 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PXMP2Q9NR77 195 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 DMAC2Q9NW81 257 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 HOXC10Q9NYD6 342 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 AIPL1Q9NZN9 384 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 TMOD4Q9NZQ9 345 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 COL20A1Q9P218 1284 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 LARSQ9P2J5 1176 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 KCNG1Q9UIX4 513 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 CDC23Q9UJX2 597 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 ZNF214Q9UL59 606 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 REXO2Q9Y3B8 237 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 BZW2Q9Y6E2 419 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
CTNNA1-228ENST00000521640 PTPRFP10586 1907 aa7.33□□□□□ -1.24
CTNNA1-228ENST00000521640 LOC102724159A0A0B4J2E5 919 aa7.33□□□□□ -1.24
CTNNA1-228ENST00000521640 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms