RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ATP8B4Q8TF62 1192 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 GLG1Q92896 1179 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 CNOT6LQ96LI5 555 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 CEP89Q96ST8 783 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 PCYT2Q99447 389 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 VPS16Q9H269 839 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 NDST4Q9H3R1 872 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 KIAA1586Q9HCI6 787 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 DAAM1Q9Y4D1 1078 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 AKR1B15C9JRZ8 316 aaPredicted RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 TEX33O43247 280 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 KPNA6O60684 536 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 ARIH2O95376 493 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 NR2F2P24468 414 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 HOXD10P28358 340 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 NAMPTP43490 491 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 NPTX2P47972 431 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 EFNA5P52803 228 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 PEX3P56589 373 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 ARHGEF6Q15052 776 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 SLFN12LQ6IEE8 588 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 SYCP3Q8IZU3 236 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 ZNF397Q8NF99 534 aaPredicted RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 KIAA1524Q8TCG1 905 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 KMT5AQ9NQR1 393 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 INTS13Q9NVM9 706 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
TPM3-221ENST00000513769 CAPN11Q9UMQ6 739 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 FRMD4BQ9Y2L6 1034 aa10.83□□□□□ -0.68
TPM3-221ENST00000513769 LCTP09848 1927 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 COL1A2P08123 1366 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 A0A1W2PQJ5 194 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 GTPBP10A4D1E9 387 aaKnown RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 RRN3P2A6NIE6 340 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 A6NJR5 290 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 PMM2O15305 246 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CCP110O43303 1012 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 GDF9O60383 454 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 NR3C1P04150 777 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 MYBP10242 640 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 EPB41P11171 864 aaKnown RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 SKILP12757 684 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 PTGS1P23219 599 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CNGA1P29973 690 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CASP5P51878 434 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 FCGRTP55899 365 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 TNFAIP2Q03169 654 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CRHR2Q13324 411 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 KIF22Q14807 665 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 DGKDQ16760 1214 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 MIIPQ5JXC2 388 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 CTU1Q7Z7A3 348 aaKnown RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 USP37Q86T82 979 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 FBXO16Q8IX29 292 aaPredicted RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 TMEM161BQ8NDZ6 487 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 NPLOC4Q8TAT6 608 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
TPM3-221ENST00000513769 ZNF215Q9UL58 517 aaPredicted RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 LUC7L2Q9Y383 392 aaKnown RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM3-221ENST00000513769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM3-221ENST00000513769 MYH9P35579 1960 aaKnown RBP10.82□□□□□ -0.68
TPM3-221ENST00000513769 CCDC169A6NNP5 214 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 H3BRB1 525 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 K7ERI5 159 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 TNPO2O14787 897 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 P4HA2O15460 535 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 LDHAP00338 332 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 GARTP22102 1010 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 TMOD1P28289 359 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 NKX3-2P78367 333 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 POU5F1Q01860 360 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 PLCB4Q15147 1175 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 MTERF2Q49AM1 385 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 CCDC40Q4G0X9 1142 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 ZC2HC1CQ53FD0 456 aaPredicted RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 HSP90AA4PQ58FG1 418 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 INTS8Q75QN2 995 aaKnown RBP10.81□□□□□ -0.68
TPM3-221ENST00000513769 TMTC1Q8IUR5 882 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 HOMEZQ8IX15 550 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 VTI1AQ96AJ9 217 aa10.81□□□□□ -0.68
TPM3-221ENST00000513769 BORCS6Q96GS4 357 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 343.4 ms