RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TTC3P53804 2025 aa13.69□□□□□ -0.22
MRPL55-233ENST00000495899 COL6A3P12111 3177 aa13.69□□□□□ -0.22
MRPL55-233ENST00000495899 LRRIQ4A6NIV6 560 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 TSPAN1O60635 241 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 FGFR1P11362 822 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 GUCY2CP25092 1073 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 NASPP49321 788 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 EFNA5P52803 228 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 NOTUMQ6P988 496 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 MRPL10Q7Z7H8 261 aaKnown RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 P2RX5Q93086 422 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 PGBD4Q96DM1 585 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 FZD8Q9H461 694 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
MRPL55-233ENST00000495899 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
MRPL55-233ENST00000495899 GBF1Q92538 1859 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-233ENST00000495899 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-233ENST00000495899 MARCKSP29966 332 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-233ENST00000495899 CTNNB1P35222 781 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 GATMP50440 423 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
MRPL55-233ENST00000495899 GPM6BQ13491 265 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 AMHR2Q16671 573 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 PTPROQ16827 1216 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
MRPL55-233ENST00000495899 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 CSRNP2Q9H175 543 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
MRPL55-233ENST00000495899 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 HIP1RO75146 1068 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 F13A1P00488 732 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 GRIN1Q05586 938 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 BECN1Q14457 450 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 MAPK6Q16659 721 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 CLLU1OSQ5K130 101 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 UBXN11Q5T124 520 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 BSNDQ8WZ55 320 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 PLIN2Q99541 437 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 NTPCRQ9BSD7 190 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 RUSC1Q9BVN2 902 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 LMAN2LQ9H0V9 348 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
MRPL55-233ENST00000495899 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
MRPL55-233ENST00000495899 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 ACKR2O00590 384 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 PPP6R2O75170 966 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 YEATS4O95619 227 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
MRPL55-233ENST00000495899 ARF4P18085 180 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-233ENST00000495899 LAG3P18627 525 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
MRPL55-233ENST00000495899 DDIT3P35638 169 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 TXLNAP40222 546 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 STK38Q15208 465 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 SLC27A1Q6PCB7 646 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 DAW1Q8N136 415 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 RASSF8Q8NHQ8 419 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
MRPL55-233ENST00000495899 KANSL3Q9P2N6 904 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms