RNA–Protein interactions for RNA: ENST00000494669.2

FGD3-208, Transcript of FYVE, RhoGEF and PH domain containing 3, human

TSL 3

Gene FGD3, Length 915 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD3-208	ENST00000494669	ECHDC2	Q86YB7	292 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	HELQ	Q8TDG4	1101 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	RIPOR3	Q96MK2	946 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	MAP7D2	Q96T17	732 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	LXN	Q9BS40	222 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	POMK	Q9H5K3	350 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	DHX33	Q9H6R0	707 aa	Known RBP	13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	NR2E1	Q9Y466	385 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	KIF3A	Q9Y496	699 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	HCFC2	Q9Y5Z7	792 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	SPTBN4	Q9H254	2564 aa		13.86	□□□□□ -0.19
FGD3-208	ENST00000494669	C2orf71	A6NGG8	1288 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	C2CD4D	B7Z1M9	353 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	NT5C1B-RDH14	C9J2C7	533 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669		H3BQV1	296 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	MED24	O75448	989 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	BRD1	O95696	1058 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	WEE2	P0C1S8	567 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	EIF4B	P23588	611 aa	Known RBP	13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	FXR2	P51116	673 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	CYP4A11	Q02928	519 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	PTGDR	Q13258	359 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	SMC1A	Q14683	1233 aa	Known RBP	13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	TPRN	Q4KMQ1	711 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	ASCL5	Q7RTU5	278 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	SLC39A11	Q8N1S5	342 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	MRPL43	Q8N983	215 aa	Known RBP	13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	CASP10	Q92851	521 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	SCLT1	Q96NL6	688 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	SMOC2	Q9H3U7	446 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	ZSWIM4	Q9H7M6	989 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	CYP26B1	Q9NR63	512 aa		13.85	□□□□□ -0.19
FGD3-208	ENST00000494669	MYH15	Q9Y2K3	1946 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	CACNA1A	O00555	2505 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669		A0A087WWV3	80 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	CLASP2	O75122	1294 aa	Known RBP	13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	CSDE1	O75534	798 aa	Known RBP	13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	SYT1	P21579	422 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	TMOD1	P28289	359 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	YWHAB	P31946	246 aa	Known RBP	13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	GPC3	P51654	580 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	TBC1D8B	Q0IIM8	1120 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	MTMR3	Q13615	1198 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	ECM1	Q16610	540 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	CES5A	Q6NT32	575 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	CATSPER3	Q86XQ3	398 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	TPH2	Q8IWU9	490 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	IGSF22	Q8N9C0	903 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	ADAM7	Q9H2U9	754 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	NOL7	Q9UMY1	257 aa	Known RBP	13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	SORCS3	Q9UPU3	1222 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669	WDR87	Q6ZQQ6	2873 aa		13.84	□□□□□ -0.19
FGD3-208	ENST00000494669		A0A0U1RQF3	1178 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	VPS37C	A5D8V6	355 aa	Predicted RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	DKC1	O60832	514 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ASGR2	P07307	311 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	XRCC6	P12956	609 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	DARS	P14868	501 aa	Known RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	PRPH	P41219	470 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	BCAR1	P56945	870 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ATP2C1	P98194	919 aa	Predicted RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ITIH3	Q06033	890 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	PDIA5	Q14554	519 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	RILPL1	Q5EBL4	403 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	RARS2	Q5T160	578 aa	Known RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	KANK3	Q6NY19	840 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ZNF598	Q86UK7	904 aa	Known RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	C12orf76	Q8N812	135 aa	Predicted RBP	13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	NLRP7	Q8WX94	980 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	AUTS2	Q8WXX7	1259 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	NECTIN4	Q96NY8	510 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	TUFT1	Q9NNX1	390 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	XPNPEP1	Q9NQW7	623 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ANKEF1	Q9NU02	776 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	PPME1	Q9Y570	386 aa		13.83	□□□□□ -0.2
FGD3-208	ENST00000494669	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	GALR2	O43603	387 aa	Predicted RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	CXCL14	O95715	111 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	RPA1	P27694	616 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	ALDH7A1	P49419	539 aa	Known RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	RARRES1	P49788	294 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	REST	Q13127	1097 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	LONRF3	Q496Y0	759 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	TMEM173	Q86WV6	379 aa	Predicted RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	UBALD2	Q8IYN6	164 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	TMEM105	Q8N8V8	129 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	TMEM169	Q96HH4	297 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	CEP170P1	Q96L14	293 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	MMTAG2	Q9BU76	263 aa	Known RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	MRPL9	Q9BYD2	267 aa	Known RBP	13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	IRF2BPL	Q9H1B7	796 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	MTMR6	Q9Y217	621 aa		13.82	□□□□□ -0.2
FGD3-208	ENST00000494669	PRR23A	A6NEV1	266 aa		13.81	□□□□□ -0.2
FGD3-208	ENST00000494669	LAD1	O00515	517 aa		13.81	□□□□□ -0.2
FGD3-208	ENST00000494669	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
FGD3-208	ENST00000494669	EOMES	O95936	686 aa		13.81	□□□□□ -0.2
FGD3-208	ENST00000494669	EPCAM	P16422	314 aa		13.81	□□□□□ -0.2
FGD3-208	ENST00000494669	MTHFR	P42898	656 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms