RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 EIF4BP23588 611 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 GRIK1P39086 918 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 NPTX2P47972 431 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CLCN2P51788 898 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 KLHL30Q0D2K2 578 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 PPFIA1Q13136 1202 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 LAMB3Q13751 1172 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 DPYSQ14117 519 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 GALEQ14376 348 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 PPP2R5EQ16537 467 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR158Q5T848 1215 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 PPP1R21Q6ZMI0 780 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC149Q6ZUS6 474 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM47EQ6ZV65 393 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CENPQQ7L2Z9 268 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 SH3RF1Q7Z6J0 888 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC83Q8IWF9 413 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM174AQ8TBP5 190 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 DNAAF4Q8WXU2 420 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 FRAT1Q92837 279 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 ALKBH8Q96BT7 664 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 SAMD11Q96NU1 681 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CRB3Q9BUF7 120 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 C11orf16Q9NQ32 467 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 DACT1Q9NYF0 836 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR34Q9UPC5 381 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 A0A0G2JPF8 293 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CLRN2A0PK11 232 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 HNRNPCL3B7ZW38 293 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SGK1O00141 431 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CAPN9O14815 690 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 RNF113AO15541 343 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SOCS5O75159 536 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 GOSR1O95249 250 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 OLFM2O95897 454 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 PDHA1P08559 390 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 FBXO45P0C2W1 286 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 HNRNPCL4P0DMR1 293 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 NR2C2P49116 596 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CLNS1AP54105 237 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CCNA1P78396 465 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CDC16Q13042 620 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SMAD4Q13485 552 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 MMEL1Q495T6 779 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SLC6A19Q695T7 634 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 PDCL2Q8N4E4 241 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 ANKRD53Q8N9V6 530 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 TBC1D5Q92609 795 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 KIFC2Q96AC6 838 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 NAA15Q9BXJ9 866 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 UBE2OQ9C0C9 1292 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 MYLK2Q9H1R3 596 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 NSMCE4AQ9NXX6 385 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 FNIP2Q9P278 1114 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 MAPRE3Q9UPY8 281 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 FCF1Q9Y324 198 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 TMED5Q9Y3A6 229 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM86C2PA6NEL3 165 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 RRN3P2A6NIE6 340 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC169A6NNP5 214 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR182O15218 404 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 KCNJ13O60928 360 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SLITRK3O94933 977 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 MAP3K6O95382 1288 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 ZKSCAN1P17029 563 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 MCM5P33992 734 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 ALDH5A1P51649 535 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 BASP1P80723 227 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 PPIDQ08752 370 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SPARCL1Q14515 664 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 STK11Q15831 433 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 BPHLQ86WA6 291 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 TRMT2AQ8IZ69 625 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 ERO1AQ96HE7 468 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CARD11Q9BXL7 1154 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 UNC93B1Q9H1C4 597 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 XAB2Q9HCS7 855 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 OGFRQ9NZT2 677 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SPEF1Q9Y4P9 236 aa6.62□□□□□ -1.35
SMARCE1-208ENST00000474246 SETXQ7Z333 2677 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 MED19A0JLT2 244 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ABLIM1O14639 778 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ITGB1P05556 798 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 C6orf222P0C671 652 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 HDCP19113 662 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 TFEBP19484 476 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 ATP5F1P24539 256 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 NOS3P29474 1203 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR85P60893 370 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 NFIAQ12857 509 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 MEA1Q16626 185 aa6.61□□□□□ -1.35
SMARCE1-208ENST00000474246 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms