RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 OFD1O75665 1012 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 ERLIN2O94905 339 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 AK2P54819 239 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 NHLH1Q02575 133 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 ITIH3Q06033 890 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 SIGLEC14Q08ET2 396 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 LAMTOR4Q0VGL1 99 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 GIT2Q14161 759 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 PTPN21Q16825 1174 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 RARS2Q5T160 578 aaKnown RBP16.86■□□□□ 0.29
COL16A1-206ENST00000461217 BMP8AQ7Z5Y6 402 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 DDX53Q86TM3 631 aaKnown RBP16.86■□□□□ 0.29
COL16A1-206ENST00000461217 RNF149Q8NC42 400 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
COL16A1-206ENST00000461217 NECTIN4Q96NY8 510 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 MTRQ99707 1265 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 RSAD1Q9HA92 442 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 DNAJB4Q9UDY4 337 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 FAM205CA6NFA0 338 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 GAS2O43903 313 aaKnown RBP16.85■□□□□ 0.29
COL16A1-206ENST00000461217 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 GALTP07902 379 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 CTSAP10619 480 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 SLC11A1P49279 550 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 NR5A1Q13285 461 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 EARS2Q5JPH6 523 aaKnown RBP16.85■□□□□ 0.29
COL16A1-206ENST00000461217 TPH2Q8IWU9 490 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 NECAB1Q8N987 351 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 BCL7CQ8WUZ0 217 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-206ENST00000461217 RIPOR3Q96MK2 946 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 POMKQ9H5K3 350 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 MINDY3Q9H8M7 445 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 SH2B1Q9NRF2 756 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-206ENST00000461217 DZANK1Q9NVP4 752 aa16.85■□□□□ 0.29
COL16A1-206ENST00000461217 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 ASAP2O43150 1006 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL16A1-206ENST00000461217 WEE2P0C1S8 567 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 MTHFRP42898 656 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 MRE11P49959 708 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 FOSBP53539 338 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 AGMOQ6ZNB7 445 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 ZNF280BQ86YH2 543 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 FBXL6Q8N531 539 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 C12orf76Q8N812 135 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-206ENST00000461217 CNTNAP2Q9UHC6 1331 aa16.84■□□□□ 0.29
COL16A1-206ENST00000461217 C5orf42Q9H799 3197 aa16.83■□□□□ 0.29
COL16A1-206ENST00000461217 ZBTB39O15060 712 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
COL16A1-206ENST00000461217 POMCP01189 267 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.28
COL16A1-206ENST00000461217 EPCAMP16422 314 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.28
COL16A1-206ENST00000461217 TRIM29Q14134 588 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 TFDP1Q14186 410 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 CNNM3Q8NE01 707 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 DBR1Q9UK59 544 aaKnown RBP16.83■□□□□ 0.28
COL16A1-206ENST00000461217 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
COL16A1-206ENST00000461217 C2CD4DB7Z1M9 353 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 INO80B-WBP1J3KQ70 363 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 B4GALT3O60512 393 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 DDHD2O94830 711 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 LARGE1O95461 756 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 ITGA4P13612 1032 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 FDPSP14324 419 aaKnown RBP16.82■□□□□ 0.28
COL16A1-206ENST00000461217 MXD4Q14582 209 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-206ENST00000461217 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 CALCRLQ16602 461 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 ATAT1Q5SQI0 421 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 MRPL10Q7Z7H8 261 aaKnown RBP16.82■□□□□ 0.28
COL16A1-206ENST00000461217 CABP7Q86V35 215 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 KREMEN2Q8NCW0 462 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 GTF3C6Q969F1 213 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 PRRX2Q99811 253 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 EIF2AK1Q9BQI3 630 aaKnown RBP16.82■□□□□ 0.28
COL16A1-206ENST00000461217 TMEM175Q9BSA9 504 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 EMILIN2Q9BXX0 1053 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 STK39Q9UEW8 545 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 FAN1Q9Y2M0 1017 aa16.82■□□□□ 0.28
COL16A1-206ENST00000461217 NEMFO60524 1076 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TSPAN1O60635 241 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 SLITRK3O94933 977 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 ALDH2P05091 517 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 NCLP19338 710 aaKnown RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 KLRC2P26717 231 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TXKP42681 527 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 AFF1P51825 1210 aaKnown RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 PTPN5P54829 565 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 MTMR3Q13615 1198 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 ME3Q16798 604 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms