RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, human

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHB-204	ENST00000450584	LINC00271	P0C7V0	271 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	SELP	P16109	830 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	ICAM3	P32942	547 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	FANCC	Q00597	558 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	CYP4A11	Q02928	519 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.77	□□□□□ -0.69	1e-7	■□□□□ 10.7
LDHB-204	ENST00000450584	PTPN21	Q16825	1174 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	NFRKB	Q6P4R8	1299 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	ZSCAN30	Q86W11	494 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	TMEM192	Q8IY95	271 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	SMRP1	Q8NCR6	262 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	RDM1	Q8NG50	284 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	AFAP1L1	Q8TED9	768 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	DDX12P	Q92771	950 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	PURB	Q96QR8	312 aa	Known RBP	10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	PDCD2L	Q9BRP1	358 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	MMTAG2	Q9BU76	263 aa	Known RBP	10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	IGFLR1	Q9H665	355 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	ZSWIM4	Q9H7M6	989 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	A1CF	Q9NQ94	594 aa	Known RBP	10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	KCNH7	Q9NS40	1196 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	PKD2L1	Q9P0L9	805 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	IFNK	Q9P0W0	207 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	COL4A3BP	Q9Y5P4	624 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	UBIAD1	Q9Y5Z9	338 aa		10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	FLNB	O75369	2602 aa	Known RBP	10.77	□□□□□ -0.69
LDHB-204	ENST00000450584	SPEG	Q15772	3267 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	ZZEF1	O43149	2961 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	IGLV3-22	A0A075B6J6	115 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584		A0A087WWV3	80 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	NCK2	O43639	380 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	PSMD10	O75832	226 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	P4HB	P07237	508 aa	Known RBP	10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	PSAP	P07602	524 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	GAP43	P17677	238 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	CASP1	P29466	404 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	STX17	P56962	302 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	ADAM15	Q13444	863 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	NAALADL2	Q58DX5	795 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	IQSEC1	Q6DN90	963 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	GDF6	Q6KF10	455 aa	Predicted RBP	10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	KCNV1	Q6PIU1	500 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	POTEG	Q6S5H5	508 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	OTUD6A	Q7L8S5	288 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	CATSPER3	Q86XQ3	398 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	MYOCD	Q8IZQ8	938 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	CCDC150	Q8NCX0	1101 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	ATP6V0A1	Q93050	837 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	WNT8B	Q93098	351 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	RPGRIP1	Q96KN7	1286 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	SAMD11	Q96NU1	681 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	PNMA5	Q96PV4	448 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	AGO4	Q9HCK5	861 aa	Known RBP	10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	FANCL	Q9NW38	375 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	CYP39A1	Q9NYL5	469 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	KCNG1	Q9UIX4	513 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	USP15	Q9Y4E8	981 aa	Predicted RBP	10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	PCDHGC5	Q9Y5F6	944 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	CEP295	Q9C0D2	2601 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	FRMPD4	Q14CM0	1322 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	FRY	Q5TBA9	3013 aa		10.76	□□□□□ -0.69
LDHB-204	ENST00000450584	ESPN	B1AK53	854 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584		E9PMD0	336 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	MED24	O75448	989 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	EIF3J	O75822	258 aa	Known RBP	10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CKB	P12277	381 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CCNE1	P24864	410 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	PRCP	P42785	496 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	LRRC63	Q05C16	580 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	RBL2	Q08999	1139 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CAMK1	Q14012	370 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CTTN	Q14247	550 aa	Known RBP	10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	PTGIS	Q16647	500 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	TSR1	Q2NL82	804 aa	Known RBP	10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	DUSP28	Q4G0W2	176 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	FAM26F	Q5R3K3	315 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	MIS18BP1	Q6P0N0	1132 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	PPFIBP1	Q86W92	1011 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CSGALNACT2	Q8N6G5	542 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	SYT2	Q8N9I0	419 aa	Predicted RBP	10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CYP2W1	Q8TAV3	490 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	CAGE1	Q8TC20	777 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	P2RX5	Q93086	422 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	GJA10	Q969M2	543 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	LENG9	Q96B70	501 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	DYDC2	Q96IM9	177 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	LXN	Q9BS40	222 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	TIPIN	Q9BVW5	301 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	SMOC2	Q9H3U7	446 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	THAP9	Q9H5L6	903 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	VAV3	Q9UKW4	847 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	NOD1	Q9Y239	953 aa		10.75	□□□□□ -0.69
LDHB-204	ENST00000450584	LOC102724159	A0A0B4J2E5	919 aa		10.74	□□□□□ -0.69
LDHB-204	ENST00000450584	MYMK	A6NI61	221 aa		10.74	□□□□□ -0.69
LDHB-204	ENST00000450584	ASB14	A6NK59	587 aa		10.74	□□□□□ -0.69
LDHB-204	ENST00000450584	BACH1	O14867	736 aa		10.74	□□□□□ -0.69
LDHB-204	ENST00000450584	N4BP3	O15049	544 aa		10.74	□□□□□ -0.69
LDHB-204	ENST00000450584	CALU	O43852	315 aa	Predicted RBP	10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms