RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RIPOR2Q9Y4F9 1068 aa5.7□□□□□ -1.5
HMGB1P45-201ENST00000435986 PMF1-BGLAPU3KQ54 211 aa5.7□□□□□ -1.5
HMGB1P45-201ENST00000435986 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 IL18BPO95998 194 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZBED1O96006 694 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 HMGCRP04035 888 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 HRGP04196 525 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ATF2P15336 505 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 POLD1P28340 1107 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ECHS1P30084 290 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ADAM9Q13443 819 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 VPS72Q15906 364 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 MLANAQ16655 118 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 TMEM200BQ69YZ2 307 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 DAAM2Q86T65 1068 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 FAM129CQ86XR2 697 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 LYSMD2Q8IV50 215 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 UNC5BQ8IZJ1 945 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 LINC00482Q8N8I6 264 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZBTB34Q8NCN2 500 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 ACRBPQ8NEB7 543 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 RIN2Q8WYP3 895 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 TIFAQ96CG3 184 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 CYFIP2Q96F07 1278 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 CDK5RAP3Q96JB5 506 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 MCOLN1Q9GZU1 580 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 HAPLN2Q9GZV7 340 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 EPB41L4AQ9HCS5 686 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
HMGB1P45-201ENST00000435986 SGTAO43765 313 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 MGEA5O60502 916 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 ADCY8P40145 1251 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 ATP2B3Q16720 1220 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 RSPH3Q86UC2 560 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 STK32CQ86UX6 486 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 SMC5Q8IY18 1101 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 EXOC8Q8IYI6 725 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 FAM167AQ96KS9 214 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 SIGLEC10Q96LC7 697 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 UHRF1Q96T88 793 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 TMEM60Q9H2L4 133 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 TDP1Q9NUW8 608 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 DNAI1Q9UI46 699 aa5.68□□□□□ -1.5
HMGB1P45-201ENST00000435986 MYOCOSA0A1B0GUC4 107 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 CAPN8A6NHC0 703 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 RFXAPO00287 272 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 TPP1O14773 563 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 TUSC2O75896 110 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 UBXN7O94888 489 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 KNG1P01042 644 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 CELA3BP08861 270 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 RHCEP18577 417 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 IGFBP6P24592 240 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 ETV4P43268 484 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 KCNQ1P51787 676 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 WNT3AP56704 352 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 GPSM2P81274 684 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 RHDQ02161 417 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 EIF4HQ15056 248 aaKnown RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 KIAA0753Q2KHM9 967 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZNF568Q3ZCX4 644 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 ANO6Q4KMQ2 910 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 PRR23BQ6ZRT6 265 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 REXO1L1PQ8IX06 675 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 RHOT1Q8IXI2 618 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 C3orf20Q8ND61 904 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 PPP1R14CQ8TAE6 165 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 GCDHQ92947 438 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 RGMAQ96B86 450 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 PRDM12Q9H4Q4 367 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 C14orf93Q9H972 538 aaKnown RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 DDX21Q9NR30 783 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 CNNM1Q9NRU3 951 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 NTMQ9P121 344 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 DDX20Q9UHI6 824 aaKnown RBP5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 SERPINB13Q9UIV8 391 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 FAM50BQ9Y247 325 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 STXBP5LQ9Y2K9 1186 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 PTPN22Q9Y2R2 807 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 IPPQ9Y573 584 aa5.67□□□□□ -1.5
HMGB1P45-201ENST00000435986 GOLIM4O00461 696 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 B3GALT2O43825 422 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 GASTP01350 101 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 FTLP02792 175 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 CYP1A1P04798 512 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 HTR1BP28222 390 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 IL13P35225 146 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 THBS2P35442 1172 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 DLG4P78352 724 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 RAB39AQ14964 217 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZMAT1Q5H9K5 638 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZNF648Q5T619 568 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 PHF19Q5T6S3 580 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms