RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KRT87PA6NCN2 255 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 GRIN1Q05586 938 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SPON2Q9BUD6 331 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SEL1LQ9UBV2 794 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 PI4K2BG5E9Z4 385 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 NMT2O60551 498 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SDC4P31431 198 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ETF1P62495 437 aaKnown RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 KRT76Q01546 638 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 RBL2Q08999 1139 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CUL1Q13616 776 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SYTL3Q4VX76 610 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 BTBD8Q5XKL5 378 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SDE2Q6IQ49 451 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CRAMP1Q96RY5 1269 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 DNAJC17Q9NVM6 304 aaKnown RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ADAM22Q9P0K1 906 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CDC23Q9UJX2 597 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 UBE4BO95155 1302 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ZSCAN9O15535 394 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CDC25AP30304 524 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 PRELPP51888 382 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ITPK1Q13572 414 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ZNF235Q14590 738 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 KLHL29Q96CT2 875 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SNX5Q9Y5X3 404 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 FTCDO95954 541 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CAPZA2P47755 286 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 AARSP49588 968 aaKnown RBP eCLIP9.51□□□□□ -0.893e-6■□□□□ 10.9
CTNND1-208ENST00000428599 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CYP27A1Q02318 531 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 LRRC63Q05C16 580 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 MORF4L2Q15014 288 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 LRRC8AQ8IWT6 810 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ZNF34Q8IZ26 560 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 TRIML2Q8N7C3 387 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 WDR48Q8TAF3 677 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CEP95Q96GE4 821 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 FOPNLQ96NB1 174 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 RAVER2Q9HCJ3 691 aaKnown RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ZSCAN32Q9NX65 697 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 TJP2Q9UDY2 1190 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 IQSEC2Q5JU85 1478 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ASB14A6NK59 587 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 M0QYV0 167 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ENC1O14682 589 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ARIH2O95376 493 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 PRAMEP78395 509 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 KRT72Q14CN4 511 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 NAALADL2Q58DX5 795 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 CYB5R4Q7L1T6 521 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 RHPN2Q8IUC4 686 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 SLC35F6Q8N357 371 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ZNF560Q96MR9 790 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 APOBEC2Q9Y235 224 aaKnown RBP9.51□□□□□ -0.89
CTNND1-208ENST00000428599 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 CCNE1P24864 410 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 TMPRSS15P98073 1019 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ING2Q9H160 280 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 RGL1Q9NZL6 768 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ABCB11O95342 1321 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 UBXN8O00124 270 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 MOCS2O96007 188 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 TBXAS1P24557 533 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SFNP31947 248 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SLCO1A2P46721 670 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 OCA2Q04671 838 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 EIF2B5Q13144 721 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 LLGL1Q15334 1064 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 MMS22LQ6ZRQ5 1243 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 RASSF3Q86WH2 238 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ZBTB5O15062 677 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 HMGB3O15347 200 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 CTNND1O60716 968 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SLFN14P0C7P3 912 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SKIP12755 728 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SPP2Q13103 211 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ANO4Q32M45 955 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SPDYE7PQ495Y7 208 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 C6orf118Q5T5N4 469 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 MFN1Q8IWA4 741 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SPATA33Q96N06 139 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 TRPC7Q9HCX4 862 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms