RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 RNF19AQ9NV58 838 aa6.45□□□□□ -1.38
HDAC8-212ENST00000421523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDAC8-212ENST00000421523 NOC2LQ9Y3T9 749 aaKnown RBP6.45□□□□□ -1.38
HDAC8-212ENST00000421523 SQORQ9Y6N5 450 aa6.45□□□□□ -1.38
HDAC8-212ENST00000421523 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SPAG17Q6Q759 2223 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 MGAQ8IWI9 3026 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 NBPF19A0A087WUL8 3843 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SPAARA0A1B0GVQ0 90 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 MBLAC1A4D2B0 266 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SHISA7A6NL88 538 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 HOXA2O43364 376 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 EPN2O95208 641 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CAPNS1P04632 268 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SPATA31D3P0C874 917 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 TGFB3P10600 412 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CEACAM1P13688 526 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CNR2P34972 360 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CXCL12P48061 93 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 MRPS9P82933 396 aaKnown RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 FGD1P98174 961 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 KRT76Q01546 638 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SEMA3FQ13275 785 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 UAP1L1Q3KQV9 507 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CLLU1OSQ5K130 101 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 METTL7BQ6UX53 244 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 SPATA31D4Q6ZUB0 917 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 KBTBD6Q86V97 674 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 LONP2Q86WA8 852 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 MB21D2Q8IYB1 491 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 ZNF843Q8N446 348 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 CMASQ8NFW8 434 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 HELQQ8TDG4 1101 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 TRAPPC12Q8WVT3 735 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 ZNF707Q96C28 371 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 PIGSQ96S52 555 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 UBL7Q96S82 380 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 UBAC1Q9BSL1 405 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 VN1R3Q9BXE9 311 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 ST3GAL5Q9UNP4 418 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 MRPS17Q9Y2R5 130 aaKnown RBP6.44□□□□□ -1.38
HDAC8-212ENST00000421523 PCDHA1Q9Y5I3 950 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 IRAK3Q9Y616 596 aa6.44□□□□□ -1.38
HDAC8-212ENST00000421523 PNMA6FA0A0J9YX94 578 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 E7EWF7 191 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 MEIS2O14770 477 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 FSHRP23945 695 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 SMARCA1P28370 1054 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 CCND2P30279 289 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 HOXA13P31271 388 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 TCF7P36402 384 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 POLGP54098 1239 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 PLA2G2CQ5R387 149 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 MTSS1LQ765P7 747 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 DDX53Q86TM3 631 aaKnown RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 CHCHD4Q8N4Q1 142 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 MDM1Q8TC05 714 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 INPP4AQ96PE3 977 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 MAP3K14Q99558 947 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 PHF20Q9BVI0 1012 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 CCDC86Q9H6F5 360 aaKnown RBP6.43□□□□□ -1.38
HDAC8-212ENST00000421523 LMAN1LQ9HAT1 526 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 CDHR5Q9HBB8 845 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 LY9Q9HBG7 655 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 VPS45Q9NRW7 570 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 F5P12259 2224 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 ITPR3Q14573 2671 aa6.43□□□□□ -1.38
HDAC8-212ENST00000421523 SHROOM3Q8TF72 1996 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 LNP1A1A4G5 178 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 SPATA31C2B4DYI2 1134 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 GCOM1H8Y6P7 765 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 PIK3CDO00329 1044 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 IFIT3O14879 490 aaKnown RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 GLUD1P00367 558 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 POLR2MP0CAP2 368 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 INSRRP14616 1297 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 CSRP1P21291 193 aaKnown RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 PXNP49023 591 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 AK2P54819 239 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 NTHL1P78549 312 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 SIM1P81133 766 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 NEDD9Q14511 834 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 ELMSAN1Q6PJG2 1045 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 TMEFF1Q8IYR6 380 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 NCOA7Q8NI08 942 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 RUFY2Q8WXA3 655 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 IGSF21Q96ID5 467 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 SPZ1Q9BXG8 430 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 GBP3Q9H0R5 595 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 ADAMTS10Q9H324 1103 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 ELAC1Q9H777 363 aaKnown RBP6.42□□□□□ -1.38
HDAC8-212ENST00000421523 C2orf42Q9NWW7 574 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 ERAP1Q9NZ08 941 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 NOTCH2Q04721 2471 aa6.42□□□□□ -1.38
HDAC8-212ENST00000421523 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms