RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 VSIG10L2P0DP72 767 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 KIR2DL3P43628 341 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 ADCY7P51828 1080 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 MEF2AQ02078 507 aaPredicted RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 HGFACQ04756 655 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 ADRM1Q16186 407 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 GAGE13Q4V321 117 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 MUM1L1Q5H9M0 696 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 ODR4Q5SWX8 454 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 SLFN13Q68D06 897 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 BTNL9Q6UXG8 535 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 TAS1R1Q7RTX1 841 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 ANKRD53Q8N9V6 530 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 GLB1L3Q8NCI6 653 aaPredicted RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS41-206ENST00000418457 CFHR4Q92496 578 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 JADE3Q92613 823 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 RPL10LQ96L21 214 aaKnown RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 TEKT5Q96M29 485 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 LRRC37BQ96QE4 947 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 AASDHPPTQ9NRN7 309 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 OAZ3Q9UMX2 235 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA9Q9Y5G4 932 aaKnown RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA8Q9Y5G5 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA7Q9Y5G6 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA6Q9Y5G7 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA3Q9Y5H0 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA2Q9Y5H1 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 SMARCA4P51532 1647 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 SMARCA2P51531 1590 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 CEP164Q9UPV0 1460 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 PMS2P1A4D2B8 440 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 NPEPPSL1A6NEC2 478 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 SLC26A4O43511 780 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 PRICKLE3O43900 615 aaPredicted RBP3.49□□□□□ -1.85
VPS41-206ENST00000418457 CDC14BO60729 498 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 TMEM127O75204 238 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 PLATP00750 562 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 CR2P20023 1033 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 HOXA5P20719 270 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 CTSSP25774 331 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 RECQLP46063 649 aaPredicted RBP3.49□□□□□ -1.85
VPS41-206ENST00000418457 EPHB1P54762 984 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 WNT3AP56704 352 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 MCL1Q07820 350 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 MALLQ13021 153 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 ODF1Q14990 250 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 ACAP1Q15027 740 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 UBE3CQ15386 1083 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 TBC1D10BQ4KMP7 808 aaPredicted RBP3.49□□□□□ -1.85
VPS41-206ENST00000418457 EFCAB2Q5VUJ9 269 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 FAM180AQ6UWF9 173 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 TTLL10Q6ZVT0 673 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 MSL3Q8N5Y2 521 aaKnown RBP3.49□□□□□ -1.85
VPS41-206ENST00000418457 PPM1NQ8N819 430 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 SHCBP1Q8NEM2 672 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 SNX33Q8WV41 574 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 RABGGTAQ92696 567 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 HOOK2Q96ED9 719 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 PTPN18Q99952 460 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 DPYSL5Q9BPU6 564 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 ADI1Q9BV57 179 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 MEGF9Q9H1U4 602 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 GREM2Q9H772 168 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 MSL2Q9HCI7 577 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 ING3Q9NXR8 418 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 RTEL1Q9NZ71 1219 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 NCDNQ9UBB6 729 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 RCAN3Q9UKA8 241 aa3.49□□□□□ -1.85
VPS41-206ENST00000418457 LUC7L2Q9Y383 392 aaKnown RBP3.49□□□□□ -1.85
VPS41-206ENST00000418457 RPTORQ8N122 1335 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 A0A0G2JLL6 359 aaPredicted RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 A0A1W2PRX2 142 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 E2F8A0AVK6 867 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 MATN2O00339 956 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 NRP1O14786 923 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 AKR1B10O60218 316 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 PHF2O75151 1096 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 NDUFS2O75306 463 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 MCAMP43121 646 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 SLC16A1P53985 500 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 ADAM8P78325 824 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 DUSP2Q05923 314 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 RIN1Q13671 783 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 NFIXQ14938 502 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 FBLN7Q53RD9 439 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 C19orf54Q5BKX5 351 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 TMEM240Q5SV17 173 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 GJC2Q5T442 439 aaPredicted RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 GLB1LQ6UWU2 654 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 ABHD15Q6UXT9 468 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 TAX1BP1Q86VP1 789 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 CIR1Q86X95 450 aaPredicted RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 GIMAP8Q8ND71 665 aaPredicted RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 GPR156Q8NFN8 814 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 JDP2Q8WYK2 163 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 RIN2Q8WYP3 895 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms