RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 APOEP02649 317 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 RCAN1P53805 252 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 CACNB1Q02641 598 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SPP2Q13103 211 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 AP3B2Q13367 1082 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SIX5Q8N196 739 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 MMGT1Q8N4V1 131 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ICA1LQ8NDH6 482 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 PBKQ96KB5 322 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 CNOT6LQ96LI5 555 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 CCDC138Q96M89 665 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 RPS6KC1Q96S38 1066 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 GJB4Q9NTQ9 266 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 EHD2Q9NZN4 543 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 PREX1Q8TCU6 1659 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 MARK3P27448 753 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ARL1P40616 181 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 POLR2FP61218 127 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 RIPK1Q13546 671 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 PFKFB3Q16875 520 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ACCSLQ4AC99 568 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ZC3H12AQ5D1E8 599 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 CROCCP3Q8IVE0 287 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 C2orf69Q8N8R5 385 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SYT2Q8N9I0 419 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 NSUN4Q96CB9 384 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 TUBGCP2Q9BSJ2 902 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 EHD4Q9H223 541 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 GOLPH3LQ9H4A5 285 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ZNRF3Q9ULT6 936 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 F5H6K3 240 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SHOX2O60902 331 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SERPINI2O75830 405 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 MOCS3O95396 460 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ALOX15P16050 662 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ABCB4P21439 1286 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 MRPS9P82933 396 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 KLRC3Q07444 240 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ADCY1Q08828 1119 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 LRRC41Q15345 812 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 SLC5A9Q2M3M2 681 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 TMCO4Q5TGY1 634 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 GRAMD1CQ8IYS0 662 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 GDAP1Q8TB36 358 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 P2RX5Q93086 422 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 LY9Q9HBG7 655 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 RIC8AQ9NPQ8 531 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 KMT5AQ9NQR1 393 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 CCDC188H7C350 402 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ATP9AO75110 1047 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ATF7P17544 494 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 PLCG1P19174 1290 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 NUDCD3Q8IVD9 361 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 TC2NQ8N9U0 490 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 KCNB2Q92953 911 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 LENG1Q96BZ8 264 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-209ENST00000412587 ZCWPW1Q9H0M4 648 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 MAN1B1Q9UKM7 699 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 AMFRQ9UKV5 643 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
PBRM1-209ENST00000412587 STK36Q9NRP7 1315 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 PSMD14O00487 310 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 TSPAN9O75954 239 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 LBRQ14739 615 aaKnown RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 PDIA6Q15084 440 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 CCDC153Q494R4 210 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 RSPH3Q86UC2 560 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 NHEJ1Q9H9Q4 299 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 FBXO40Q9UH90 709 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 HERC5Q9UII4 1024 aaKnown RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ORC4O43929 436 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 CCDC159P0C7I6 412 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 PLA2G4BP0C869 781 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ZCCHC18P0CG32 403 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 CHN1P15882 459 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 XRCC4Q13426 336 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 MTERF2Q49AM1 385 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 DPF2Q92785 391 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 NMD3Q96D46 503 aaKnown RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 TSPAN18Q96SJ8 248 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 HESX1Q9UBX0 185 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ESYT3A0FGR9 886 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms