RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PHKA2P46019 1235 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 PTENP60484 403 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 UBXN1Q04323 297 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 POU5F1BQ06416 359 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 HIC1Q14526 733 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 MAPK6Q16659 721 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 TMC6Q7Z403 805 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 TMEM174Q8WUU8 243 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 MKNK1Q9BUB5 465 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 CCDC113Q9H0I3 377 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 FAM49AQ9H0Q0 323 aaPredicted RBP22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 METTL14Q9HCE5 456 aaKnown RBP22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 HSPBP1Q9NZL4 362 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 ARMCX3Q9UH62 379 aaPredicted RBP22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 TREHO43280 583 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 PTPN21Q16825 1174 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 VWA3BQ502W6 1294 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 MIIPQ5JXC2 388 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 LHX8Q68G74 356 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 SLC39A4Q6P5W5 647 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 VSTM4Q8IW00 320 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 FAM186BQ8IYM0 893 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 SCLT1Q96NL6 688 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 NFKBIZQ9BYH8 718 aa22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.17
VCPKMT-202ENST00000395860 A0A087WZ62 844 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 INO80B-WBP1J3KQ70 363 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 PIGRP01833 764 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 PRKCBP05771 671 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 HOXC8P31273 242 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 ZNF200P98182 395 aaPredicted RBP22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 SLC9C1Q4G0N8 1177 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 XXYLT1Q8NBI6 393 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 NLRP7Q8WX94 980 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 POMGNT1Q8WZA1 660 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 FDXACB1Q9BRP7 624 aaPredicted RBP22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 INO80BQ9C086 356 aaPredicted RBP22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 IFT122Q9HBG6 1241 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 GTF2IRD1Q9UHL9 959 aa22.33■■□□□ 1.16
VCPKMT-202ENST00000395860 ADSSP30520 456 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 GPC3P51654 580 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 NLRP11P59045 1033 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 FAM47CQ5HY64 1035 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 RUFY4Q6ZNE9 571 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 TRIM59Q8IWR1 403 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 TARS2Q9BW92 718 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 MRPL4Q9BYD3 311 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 NDST4Q9H3R1 872 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 USP20Q9Y2K6 914 aa22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.32■■□□□ 1.16
VCPKMT-202ENST00000395860 CABYRO75952 493 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 GARTP22102 1010 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 CDC42EP1Q00587 391 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 MBTD1Q05BQ5 628 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 ZNF410Q86VK4 478 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 RDH13Q8NBN7 331 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 VTI1AQ96AJ9 217 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 CENPFP49454 3210 aa22.31■■□□□ 1.16
VCPKMT-202ENST00000395860 EDN1P05305 212 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 ACLYP53396 1101 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 FKBP15Q5T1M5 1219 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 SLFN12LQ6IEE8 588 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 DNAJB3Q8WWF6 145 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 TRIM44Q96DX7 344 aaPredicted RBP22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 TSEN34Q9BSV6 310 aaKnown RBP22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 UNC93B1Q9H1C4 597 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 IMPACTQ9P2X3 320 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 HTTP42858 3142 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 MOXD2PA6NHM9 499 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 MATR3P43243 847 aaKnown RBP eCLIP22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 TMEM62Q0P6H9 643 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 SPECC1LQ69YQ0 1117 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 ZPBP2Q6X784 338 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 ARRDC4Q8NCT1 418 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 FZD8Q9H461 694 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 MINDY3Q9H8M7 445 aa22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 PRMT7Q9NVM4 692 aaPredicted RBP22.3■■□□□ 1.16
VCPKMT-202ENST00000395860 ACKR2O00590 384 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 PBX1P40424 430 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 PPP2R3AQ06190 1150 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 DCAF17Q5H9S7 520 aaPredicted RBP22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 GDF6Q6KF10 455 aaPredicted RBP22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 SAAL1Q96ER3 474 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 BORCS6Q96GS4 357 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 ANKFY1Q9P2R3 1169 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 STYXL1Q9Y6J8 313 aa22.29■■□□□ 1.16
VCPKMT-202ENST00000395860 GOLGA8IPA6NC78 632 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 GOLGA8JA6NMD2 632 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 KIAA0391O15091 583 aaKnown RBP22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 MAPK13O15264 365 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 MYCP01106 439 aaPredicted RBP22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 KRT13P13646 458 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 PRPF4BQ13523 1007 aaKnown RBP22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 TMEM132AQ24JP5 1023 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 KIZQ2M2Z5 673 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 TCERG1LQ5VWI1 586 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 TAF2Q6P1X5 1199 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 CCDC186Q7Z3E2 898 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 SESTD1Q86VW0 696 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms