RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 HSPBP1Q9NZL4 362 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 GOLGA8QA0A0J9YX86 632 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 GOLGA8OA6NCC3 632 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 F8W8V4 182 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 GOLGA8NF8WBI6 632 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 SEC31AO94979 1220 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 KRT7P08729 469 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 RPA1P27694 616 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 TSNAXIP1Q2TAA8 658 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 NDUFAF2Q8N183 169 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 NUP85Q9BW27 656 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 LMCD1Q9NZU5 365 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 ANGPTL3Q9Y5C1 460 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 TNS2Q63HR2 1409 aa19.1■□□□□ 0.65
CLSTN1-202ENST00000377298 NPHP3-ACAD11A0A0J9YXS1 232 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 PYROXD1Q8WU10 500 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TNIP3Q96KP6 325 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 AGBL1Q96MI9 1066 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 EHD4Q9H223 541 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 PIN4Q9Y237 131 aaKnown RBP19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 PPLO60437 1756 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 BCL9O00512 1426 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 VGLL3A8MV65 326 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TMED2Q15363 201 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TMEM106CQ9BVX2 250 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 CAPN11Q9UMQ6 739 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 HPS5Q9UPZ3 1129 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 EXOC1LA0A1B0GW35 172 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 SPDYE2BA6NHP3 402 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 SPDYE6P0CI01 402 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 ALS2CLQ60I27 953 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 EMBQ6PCB8 327 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 C1orf228Q6PIY5 440 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 RAB3IPQ96QF0 476 aaPredicted RBP19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 NUDCD1Q96RS6 583 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TRIM62Q9BVG3 475 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 IL25Q9H293 177 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 RASGRF2O14827 1237 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 SUN1O94901 812 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 PCK1P35558 622 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 SEPT6Q14141 434 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 MID2Q9UJV3 735 aa19.09■□□□□ 0.65
CLSTN1-202ENST00000377298 STK25O00506 426 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 ICAM1P05362 532 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 C6orf222P0C671 652 aaPredicted RBP19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 EMC2Q15006 297 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 EDRF1Q3B7T1 1238 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 NUF2Q9BZD4 464 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 PPARGP37231 505 aaPredicted RBP19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 TAP1Q03518 808 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 PCGF5Q86SE9 256 aa19.08■□□□□ 0.65
CLSTN1-202ENST00000377298 A0A1B0GUA9 196 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 SLC4A1P02730 911 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 PRKCEQ02156 737 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 LMNTD2Q8IXW0 634 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 GPRASP2Q96D09 838 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 MYMKA6NI61 221 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 CTDNEP1O95476 244 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 IL1R1P14778 569 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 FAF2Q96CS3 445 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 PITPNM2Q9BZ72 1349 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 SART1O43290 800 aaKnown RBP19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 NAA25Q14CX7 972 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 ADARB2Q9NS39 739 aaKnown RBP19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 ANKEF1Q9NU02 776 aa19.08■□□□□ 0.64
CLSTN1-202ENST00000377298 ARHGAP42A6NI28 874 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 IFNAR2P48551 515 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 CNOT10Q9H9A5 744 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 MAP3K20Q9NYL2 800 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 ADGRG1Q9Y653 693 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 NWD1Q149M9 1564 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 FER1L4A9Z1Z3 1794 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 CYP2B6P20813 491 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 SNRPFP62306 86 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 KCNH7Q9NS40 1196 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 CELF2O95319 508 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 NFIAQ12857 509 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 IER5Q5VY09 327 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 PARD3BQ8TEW8 1205 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 DHX38Q92620 1227 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 ATP6V1E2Q96A05 226 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 UBN1Q9NPG3 1134 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 CYP26B1Q9NR63 512 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 KLHL8Q9P2G9 620 aaPredicted RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 MAGED2Q9UNF1 606 aaPredicted RBP19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 TRAPPC3O43617 180 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 SCP2P22307 547 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 SREBF2Q12772 1141 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 MCUQ8NE86 351 aa19.07■□□□□ 0.64
CLSTN1-202ENST00000377298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.07■□□□□ 0.641e-10■■□□□ 12.4
CLSTN1-202ENST00000377298 HBP1O60381 514 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 ARL4CP56559 192 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 RBP5P82980 135 aa19.06■□□□□ 0.64
CLSTN1-202ENST00000377298 ZNF746Q6NUN9 644 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms