RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 GPR162Q16538 588 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 SYTL5Q8TDW5 730 aaPredicted RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 LOC102724159A0A0B4J2E5 919 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 GRID2IPA4D2P6 1211 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 WDR64B1ANS9 1081 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 ANKRD63C9JTQ0 380 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 SOX5P35711 763 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 BFSP1Q12934 665 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 IFT88Q13099 833 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 EPHA7Q15375 998 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 GDAP1Q8TB36 358 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 LRRN4Q8WUT4 740 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 DAAM1Q9Y4D1 1078 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 PDXKO00764 312 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 CLDN3O15551 220 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 ATP8B1O43520 1251 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 CNGA1P29973 690 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 KCNJ6P48051 423 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 SNRNP35Q16560 246 aaKnown RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 MDM1Q8TC05 714 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 BAP1Q92560 729 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
DDR1-227ENST00000376570 C10orf88Q9H8K7 445 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
DDR1-227ENST00000376570 MYO1FO00160 1098 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 BRDTQ58F21 947 aaPredicted RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 NUCKS1Q9H1E3 243 aaKnown RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 LAMA4Q16363 1823 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 WDR91A4D1P6 747 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 PRKCEQ02156 737 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 ZIM3Q96PE6 472 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 PRRC2BQ5JSZ5 2229 aaKnown RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.45e-7■■■■■ 37.9
DDR1-227ENST00000376570 TMEM191BP0C7N4 346 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 C10orf76Q5T2E6 689 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 RNF149Q8NC42 400 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 JPH2Q9BR39 696 aaPredicted RBP12.56□□□□□ -0.4
DDR1-227ENST00000376570 KCNMB3Q9NPA1 279 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
DDR1-227ENST00000376570 FOXO6A8MYZ6 492 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 CCND2P30279 289 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 SMTNL2Q2TAL5 461 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 CREG2Q8IUH2 290 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 CASKIN2Q8WXE0 1202 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 TRIM7Q9C029 511 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 NOL4O94818 638 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 LMNB1P20700 586 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
DDR1-227ENST00000376570 E2F5Q15329 346 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 KRT35Q92764 455 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 PCDHA10Q9Y5I2 948 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 ASTN1O14525 1302 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 TGFB1I1O43294 461 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 GGPS1O95749 300 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 EPHB4P54760 987 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 DR1Q01658 176 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 SGO2Q562F6 1265 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 COPS5Q92905 334 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 PWWP2AQ96N64 755 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 IDI2Q9BXS1 227 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
DDR1-227ENST00000376570 MED4Q9NPJ6 270 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
DDR1-227ENST00000376570 COMTP21964 271 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 PSMC5P62195 406 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 AMHR2Q16671 573 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 LY6KQ17RY6 165 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 PPP1R21Q6ZMI0 780 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms