RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MIS18BP1Q6P0N0 1132 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 KRT27Q7Z3Y8 459 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 GLYCTKQ8IVS8 523 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 EIF1ADQ8N9N8 165 aaKnown RBP21.15■□□□□ 0.98
TRIM58-201ENST00000366481 ELMO3Q96BJ8 720 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 COA1Q9GZY4 146 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 SEMA4AQ9H3S1 761 aa21.15■□□□□ 0.98
TRIM58-201ENST00000366481 USP15Q9Y4E8 981 aaPredicted RBP21.15■□□□□ 0.98
TRIM58-201ENST00000366481 GH2P01242 217 aa21.14■□□□□ 0.98
TRIM58-201ENST00000366481 MSH2P43246 934 aa21.14■□□□□ 0.98
TRIM58-201ENST00000366481 SYN2Q92777 582 aaPredicted RBP21.14■□□□□ 0.98
TRIM58-201ENST00000366481 PABPC3Q9H361 631 aaKnown RBP21.14■□□□□ 0.98
TRIM58-201ENST00000366481 TDRD3Q9H7E2 651 aaKnown RBP21.14■□□□□ 0.98
TRIM58-201ENST00000366481 PTPN22Q9Y2R2 807 aa21.14■□□□□ 0.98
TRIM58-201ENST00000366481 ABCB11O95342 1321 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
TRIM58-201ENST00000366481 MAST2Q6P0Q8 1798 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 H0Y3Z8 333 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 NDUFB10O96000 172 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 ETNPPLQ8TBG4 499 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 TLCD1Q96CP7 247 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 MTRF1LQ9UGC7 380 aaKnown RBP21.14■□□□□ 0.97
TRIM58-201ENST00000366481 COPS2P61201 443 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 TAOK1Q7L7X3 1001 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 FBXO11Q86XK2 927 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 SYCE1Q8N0S2 351 aa21.14■□□□□ 0.97
TRIM58-201ENST00000366481 ECE1P42892 770 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 RIPK1Q13546 671 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 ZNF268Q14587 947 aaPredicted RBP21.13■□□□□ 0.97
TRIM58-201ENST00000366481 C6orf118Q5T5N4 469 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 PIGWQ7Z7B1 504 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 FBF1Q8TES7 1133 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 LENG9Q96B70 501 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
TRIM58-201ENST00000366481 TSC22D3Q99576 134 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 ETNK1Q9HBU6 452 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 HOMER3Q9NSC5 361 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 RASAL2Q9UJF2 1139 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 PCNTO95613 3336 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 CTCFP49711 727 aaPredicted RBP21.13■□□□□ 0.97
TRIM58-201ENST00000366481 ATXN2LQ8WWM7 1075 aaKnown RBP21.13■□□□□ 0.97
TRIM58-201ENST00000366481 AIPL1Q9NZN9 384 aa21.13■□□□□ 0.97
TRIM58-201ENST00000366481 SMNDC1O75940 238 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 LUC7L3O95232 432 aaKnown RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 GNA14O95837 355 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 RARAP10276 462 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 NEFHP12036 1026 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 NT5C2P49902 561 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 CENPTQ96BT3 561 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 AMNQ9BXJ7 453 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 FAM198AQ9UFP1 575 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 ASTN1O14525 1302 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 TISP43B9A030 160 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 RRP1BQ14684 758 aaKnown RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 VSIG1Q86XK7 387 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 RNF25Q96BH1 459 aaPredicted RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 ERP44Q9BS26 406 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 STMN4Q9H169 189 aaPredicted RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 TMOD4Q9NZQ9 345 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 PPP1R1BQ9UD71 204 aaPredicted RBP21.12■□□□□ 0.97
TRIM58-201ENST00000366481 RABGAP1Q9Y3P9 1069 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 SNX3O60493 162 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 PALB2Q86YC2 1186 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 SLC35C1Q96A29 364 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 TRIM7Q9C029 511 aa21.12■□□□□ 0.97
TRIM58-201ENST00000366481 BTAF1O14981 1849 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 PPFIA2O75334 1257 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 ACSL3O95573 720 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 MMP13P45452 471 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 AADACL2Q6P093 401 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 DYDC2Q96IM9 177 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 DNAJC17Q9NVM6 304 aaKnown RBP21.11■□□□□ 0.97
TRIM58-201ENST00000366481 A0A1W2PRG0 241 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 DDX3XO00571 662 aaKnown RBP eCLIP21.11■□□□□ 0.974e-24■■■■□ 24.8
TRIM58-201ENST00000366481 MMP10P09238 476 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 SLC30A9Q6PML9 568 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 SP8Q8IXZ3 490 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 ERMNQ8TAM6 284 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 ZFATQ9P243 1243 aa21.11■□□□□ 0.97
TRIM58-201ENST00000366481 LRRD1A4D1F6 860 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 FAM13AO94988 1023 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 SNUPNO95149 360 aaKnown RBP21.1■□□□□ 0.97
TRIM58-201ENST00000366481 SESN3P58005 492 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 LONRF1Q17RB8 773 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 HYIQ5T013 277 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 SYT2Q8N9I0 419 aaPredicted RBP21.1■□□□□ 0.97
TRIM58-201ENST00000366481 NAF1Q96HR8 494 aaKnown RBP21.1■□□□□ 0.97
TRIM58-201ENST00000366481 LBHD1Q9BQE6 289 aaPredicted RBP21.1■□□□□ 0.97
TRIM58-201ENST00000366481 PPP1R12CQ9BZL4 782 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 PCIF1Q9H4Z3 704 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 SLC5A4Q9NY91 659 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 TAS2R14Q9NYV8 317 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 ZBTB21Q9ULJ3 1066 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 RGL2O15211 777 aa21.1■□□□□ 0.97
TRIM58-201ENST00000366481 GBP1P32455 592 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms