RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Drc3Q9D5E4 523 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Spatc1lQ9D9W0 342 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Syde1Q9DBZ9 737 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Mgea5Q9EQQ9 916 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Dusp10Q9ESS0 483 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 GabrqQ9JLF1 638 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Mmel1Q9JLI3 765 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 AtmQ62388 3066 aa9.59□□□□□ -0.87
Pdlim5-209ENSMUST00000196908 Gm43638A0A0J9YU36 694 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Zscan4-ps2A0A1C7CYU6 506 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Prr16A3KMN5 304 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 NcapgE9PWG6 1004 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Zfp384E9Q1A5 584 aaKnown RBP9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Vmn2r76E9Q3F5 853 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 2310050C09RikG5E8Z3 280 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Pbx3O35317 434 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Stx1aO35526 288 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Vti1aO89116 217 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 U2af2P26369 475 aaKnown RBP9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Sptlc2P97363 560 aaKnown RBP9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Epha2Q03145 977 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Scg2Q03517 617 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Cyp2e1Q05421 493 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Gse1Q3U3C9 1213 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Jakmip3Q5DTN8 844 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Oxsr1Q6P9R2 527 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Kif1bpQ6ZPU9 617 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Sec62Q8BU14 398 aaKnown RBP9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Serpina3bQ8BYY9 420 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Gpr61Q8C010 449 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Robo4Q8C310 1012 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 KyQ8C8H8 661 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Abi1Q8CBW3 481 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Acvr1cQ8K348 493 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Stk38Q91VJ4 465 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ccer1Q9CQL2 403 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 VasnQ9CZT5 673 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Noxred1Q9D3S5 366 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 WtapQ9ER69 396 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Trim54Q9ERP3 366 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Tfap4Q9JIZ5 338 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Nudt5Q9JKX6 218 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Insl5Q9WUG6 135 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Suclg2Q9Z2I8 433 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Atad5Q4QY64 1826 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Myh8P13542 1937 aa9.58□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ttc6G3UYY4 1857 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Nup210Q9QY81 1886 aaKnown RBP9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Usp24B1AY13 2617 aaKnown RBP9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Scn5aQ9JJV9 2019 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Cpb1B2RS76 415 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Vmn2r55G3UWZ4 781 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Vmn2r53L7N473 806 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 EporP14753 507 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Slc10a3P21129 473 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Atxn1P54254 791 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ano7Q14AT5 859 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Itpripl2Q3UV16 535 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Znf827Q505G8 1078 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Arhgef2Q60875 985 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Polr3gQ6NXY9 223 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Trim17Q7TPM3 477 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Lca5Q80ST9 704 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Hook1Q8BIL5 728 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Kiaa0391Q8JZY4 584 aaKnown RBP9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Rtn1Q8K0T0 780 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Dcaf8Q8N7N5 591 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ifih1Q8R5F7 1025 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Lrrc2Q8VDB8 371 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Q9CYI0 393 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Dnajc18Q9CZJ9 357 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Nmnat1Q9EPA7 285 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 PorcnQ9JJJ7 461 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Homer1Q9Z2Y3 366 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ank3G5E8K5 1961 aa9.57□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Igkv10-96A0A140T8M1 115 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Dhx8A2A4P0 1244 aaKnown RBP9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ptchd4B9EKX1 904 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 9630041A04RikD3Z3U4 205 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Tcp10bE9PYJ0 438 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Tcp10cE9Q046 482 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 RaxO35602 342 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Stag2O35638 1231 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Dnm1P39053 867 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Nucb2P81117 420 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Prss55Q14BX2 321 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Gtf2f1Q3THK3 508 aaKnown RBP9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Asap3Q5U464 904 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Mcf2lQ64096 1149 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Wee2Q66JT0 555 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Pcdhb14Q6PB90 796 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Tmem164Q6PHN7 296 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ldoc1Q7TPY9 151 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Vps52Q8C754 723 aaKnown RBP9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Pus7lQ8CE46 702 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Pak2Q8CIN4 524 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 CerkQ8K4Q7 531 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Ugt2b1Q8R084 529 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Wasf1Q8R5H6 559 aa9.56□□□□□ -0.88
Pdlim5-209ENSMUST00000196908 Olfr1352Q8VGX5 309 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms