RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Lrrn2Q6PHP6 730 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 6820408C15RikQ8BJX2 354 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Prpf31Q8CCF0 499 aaKnown RBP11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Lrrc56Q8K375 552 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Asic2Q925H0 512 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 1700016D06RikQ9DAA5 166 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 PolkQ9QUG2 852 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ppp2r3dQ9Z176 491 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 PurbO35295 324 aaKnown RBP11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tgfbrap1Q3UR70 860 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Etaa1Q5SVT3 877 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Gas8Q60779 478 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Acad11Q80XL6 779 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Olfr395Q8VGR3 312 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tas1r1Q99PG6 842 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tmem39aQ9CYC3 486 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tpcn1Q9EQJ0 817 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Gyg1Q9R062 333 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ube3aO08759 870 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 IkbkbO88351 757 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Actn4P57780 912 aaKnown RBP11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 LbrQ3U9G9 626 aaKnown RBP11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Six2Q62232 296 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Mamdc2Q8CG85 686 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tekt1Q9DAJ2 418 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 Gm11983V9GXS8 105 aa11.69□□□□□ -0.54
Lig3-212ENSMUST00000173727 ErmardE9Q048 622 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 EpoP07321 192 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Meis3P97368 378 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 NntQ61941 1086 aaKnown RBP11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Map1sQ8C052 973 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Olfr390Q8VEZ7 311 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Slc12a9Q99MR3 914 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 PrameQ9D4Z5 464 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Mzb1Q9D8I1 188 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Slc3a2P10852 526 aaKnown RBP11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Fmr1P35922 614 aaKnown RBP11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tmtc1Q3UV71 942 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tmem232Q5K6N0 675 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Iqcb1Q8BP00 598 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ccdc73Q8CDM4 1066 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Creb3l3Q91XE9 479 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Mageb16Q9CWV4 363 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tmem206Q9D771 350 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Klra17Q9JMA4 273 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Robo3Q9Z2I4 1366 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Mmrn2A6H6E2 943 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Vmn2r63E9Q0K5 859 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Gm9268E9Q0M3 861 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Serpinb3aG3X9V8 387 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Vmn2r62K7N712 859 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Mtco1P00397 514 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Vsnl1P62761 191 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ppp3caP63328 521 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Sec31aQ3UPL0 1230 aaKnown RBP11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Asap3Q5U464 904 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Krt15Q61414 452 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Styk1Q6J9G1 429 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 LarsQ8BMJ2 1178 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tcaf1Q8BNE1 924 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Cbwd1Q8VEH6 393 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ankef1Q9D2J7 775 aa11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Cse1lQ9ERK4 971 aaKnown RBP11.68□□□□□ -0.54
Lig3-212ENSMUST00000173727 Smim10l2aA0A0B4J1F8 78 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Zfp408H7BX78 710 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Klra1P20937 262 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Wdr18Q4VBE8 431 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ahcyl2Q68FL4 613 aaKnown RBP11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Cep70Q6IQY5 616 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Prmt6Q6NZB1 378 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Fhod1Q6P9Q4 1197 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Fam177a1Q8BR63 207 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Slc9a9Q8BZ00 644 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 PdxkQ8K183 312 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Upb1Q8VC97 393 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Serpina9Q9D7D2 418 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Nfx1B1AY10 1114 aaKnown RBP11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Clca3bE9PUL3 1044 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Wnt7bP28047 349 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 rp9P97762 213 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Klra9Q2TJJ8 266 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Klra6Q60653 266 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ankfy1Q810B6 1169 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ppfibp1Q8C8U0 969 aaKnown RBP11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Celf3Q8CIN6 465 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Efna5O08543 228 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ccr1P51675 355 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 DmpkP54265 631 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Smyd5Q3TYX3 416 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 MmeQ61391 750 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 LbpQ61805 481 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Tlr2Q9QUN7 784 aa11.67□□□□□ -0.54
Lig3-212ENSMUST00000173727 Stat4P42228 749 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Lrig2Q52KR2 1054 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ccdc42Q5SV66 316 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Nek5Q7TSC3 627 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Lin9Q8C735 542 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Usp27Q8CEG8 438 aa11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Ago2Q8CJG0 860 aaKnown RBP11.66□□□□□ -0.54
Lig3-212ENSMUST00000173727 Snap47Q8R570 413 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms