RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	ATG41	Q12048	136 aa		5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	RTC5	Q12108	567 aa	Known RBP	5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	BMT6	Q12291	365 aa		5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	DFG16	Q99234	619 aa		5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	MEX67	Q99257	599 aa	Known RBP	5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	FAB1	P34756	2278 aa		5.41	□□□□□ -1.54
SUP4	tY(GUA)J2	GAL4	P04386	881 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	COX9	P07255	59 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	GCD1	P09032	578 aa	Predicted RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	CDC23	P16522	626 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	RNA14	P25298	677 aa	Known RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	YCL002C	P25565	263 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	PBN1	P25580	416 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	TIM12	P32830	109 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	PDR3	P33200	976 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	NIC96	P34077	839 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	YKL071W	P36086	256 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	CHK1	P38147	527 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	MAL32	P38158	584 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	VBA2	P38358	474 aa	Known RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	ANS1	P38832	159 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	FMP52	P40008	231 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	YER137C	P40083	148 aa	Known RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	RFC4	P40339	323 aa	Known RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	PMT6	P42934	759 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	BNA6	P43619	295 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	ECM27	P47144	725 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	GPG1	P53130	126 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	TPC1	P53257	314 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	MAL12	P53341	584 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	TIM11	P81449	96 aa	Predicted RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	RSM28	Q03430	361 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	RBS1	Q05672	457 aa	Known RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	TAZ1	Q06510	381 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	SSK1	Q07084	712 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	LUC7	Q07508	261 aa	Predicted RBP	5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	GUP2	Q08929	609 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	ATG31	Q12421	196 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	YBR298C-A	Q8TGK4	73 aa		5.4	□□□□□ -1.54
SUP4	tY(GUA)J2	CCH1	P50077	2039 aa		5.4	□□□□□ -1.55
SUP4	tY(GUA)J2	SOD2	P00447	233 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	NCP1	P16603	691 aa	Known RBP	5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	PRP2	P20095	876 aa	Predicted RBP	5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	PRE2	P30656	287 aa	Known RBP	5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	SLC1	P33333	303 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	PET112	P33893	541 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	SFK1	P35735	353 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	APL3	P38065	1025 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	RRF1	P38771	230 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	SWM2	P40342	146 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	YGR210C	P42942	411 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	CIS3	P47001	227 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	ALB1	P47019	175 aa	Predicted RBP	5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	SAY1	P53324	424 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	DID2	P69771	204 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	HLR1	Q04429	423 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	MFB1	Q04922	465 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	DCR2	Q05924	578 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	PEX30	Q06169	523 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	HDA2	Q06629	674 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	AIM6	Q07716	390 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	FRE3	Q08905	711 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	FMP40	Q08968	688 aa	Predicted RBP	5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	RDI1	Q12434	202 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	PSF1	Q12488	208 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	FMP16	Q12497	93 aa		5.39	□□□□□ -1.55
SUP4	tY(GUA)J2	NHP6B	P11633	99 aa	Known RBP	5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YPK2	P18961	677 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	NUP1	P20676	1076 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	RNQ1	P25367	405 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	NAM9	P27929	486 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	ATS1	P31386	333 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	GPX1	P36014	167 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	NAT2	P37293	288 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	GLY1	P37303	387 aa	Known RBP	5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YHR122W	P38829	231 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	SKN7	P38889	622 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	FET3	P38993	636 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	HXT9	P40885	567 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YGR012W	P53206	393 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	GIM3	P53900	129 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	NIS1	P53939	407 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	ERG13	P54839	491 aa	Known RBP	5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YML108W	Q03759	105 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	SSY1	Q03770	852 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	UTP21	Q06078	939 aa	Predicted RBP	5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YPR109W	Q06104	294 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	CYK3	Q07533	885 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	BTS1	Q12051	335 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	DAP1	Q12091	152 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	YDL109C	Q12103	647 aa		5.38	□□□□□ -1.55
SUP4	tY(GUA)J2	VPS13	Q07878	3144 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	ADK1	P07170	222 aa	Known RBP	5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	DSF1	P0CX08	502 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	YNR073C	P0CX09	502 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	GPI12	P23797	304 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
SUP4	tY(GUA)J2	DCG1	P32460	244 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	LST4	P34239	828 aa		5.37	□□□□□ -1.55
SUP4	tY(GUA)J2	PEX32	P38292	413 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms